RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 AFF3P51826 1226 aaKnown RBP3.5□□□□□ -1.85
SNORA40-201ENST00000388090 SRPK2P78362 688 aaKnown RBP3.5□□□□□ -1.85
SNORA40-201ENST00000388090 PLP2Q04941 152 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 MTMR3Q13615 1198 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 SFRP5Q5T4F7 317 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 TMEM132EQ6IEE7 984 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 PRPF40BQ6NWY9 871 aaKnown RBP3.5□□□□□ -1.85
SNORA40-201ENST00000388090 ARMCX6Q7L4S7 300 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 GPR20Q99678 358 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 BDH2Q9BUT1 245 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 EHD4Q9H223 541 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 EPB41L4AQ9HCS5 686 aaPredicted RBP3.5□□□□□ -1.85
SNORA40-201ENST00000388090 CACNA2D2Q9NY47 1150 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 ZSWIM5Q9P217 1185 aa3.5□□□□□ -1.85
SNORA40-201ENST00000388090 VMACQ2NL98 169 aa3.49□□□□□ -1.85
SNORA40-201ENST00000388090 FRMD5Q7Z6J6 570 aa3.49□□□□□ -1.85
SNORA40-201ENST00000388090 SP8Q8IXZ3 490 aa3.49□□□□□ -1.85
SNORA40-201ENST00000388090 SLC16A11Q8NCK7 471 aa3.49□□□□□ -1.85
SNORA40-201ENST00000388090 GPBAR1Q8TDU6 330 aa3.49□□□□□ -1.85
SNORA40-201ENST00000388090 GTF3C2Q8WUA4 911 aaPredicted RBP3.49□□□□□ -1.85
SNORA40-201ENST00000388090 INTS4Q96HW7 963 aaKnown RBP3.49□□□□□ -1.85
SNORA40-201ENST00000388090 SIGLEC10Q96LC7 697 aa3.49□□□□□ -1.85
SNORA40-201ENST00000388090 YBX2Q9Y2T7 364 aaKnown RBP3.49□□□□□ -1.85
SNORA40-201ENST00000388090 TMEM238LA0A1B0GVL6 79 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 LRIG2O94898 1065 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 ZNF252P-AS1Q0IIN9 211 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 AAMPQ13685 434 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 ZBTB37Q5TC79 503 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 TMPRSS7Q7RTY8 843 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 LILRA2Q8N149 483 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 PDZD8Q8NEN9 1154 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 SORCS2Q96PQ0 1159 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 CWC22Q9HCG8 908 aaKnown RBP3.48□□□□□ -1.85
SNORA40-201ENST00000388090 NPHS2Q9NP85 383 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 LUC7LQ9NQ29 371 aaKnown RBP3.48□□□□□ -1.85
SNORA40-201ENST00000388090 CCDC87Q9NVE4 849 aa3.48□□□□□ -1.85
SNORA40-201ENST00000388090 MBD1Q9UIS9 605 aaPredicted RBP3.48□□□□□ -1.85
SNORA40-201ENST00000388090 TPX2Q9ULW0 747 aaKnown RBP3.48□□□□□ -1.85
SNORA40-201ENST00000388090 WASH4PA8MWX3 477 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 MATN3O15232 486 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 FANCGO15287 622 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 PRICKLE3O43900 615 aaPredicted RBP3.47□□□□□ -1.85
SNORA40-201ENST00000388090 ATG7O95352 703 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 ZGLP1P0C6A0 271 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 TNK2Q07912 1038 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 RTP5Q14D33 572 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 NR0B2Q15466 257 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 MAP1SQ66K74 1059 aaPredicted RBP3.47□□□□□ -1.85
SNORA40-201ENST00000388090 MPRIPQ6WCQ1 1025 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 MENTQ9BUN1 341 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 TMEM39AQ9NV64 488 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 CSADQ9Y600 493 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 IRAK3Q9Y616 596 aa3.47□□□□□ -1.85
SNORA40-201ENST00000388090 DCDC2CA8MYV0 355 aa3.46□□□□□ -1.86
SNORA40-201ENST00000388090 ARNTP27540 789 aa3.46□□□□□ -1.86
SNORA40-201ENST00000388090 EPHB3P54753 998 aa3.46□□□□□ -1.86
SNORA40-201ENST00000388090 C12orf40Q86WS4 652 aa3.46□□□□□ -1.86
SNORA40-201ENST00000388090 SULF2Q8IWU5 870 aa3.46□□□□□ -1.86
SNORA40-201ENST00000388090 RIN3Q8TB24 985 aa3.46□□□□□ -1.86
SNORA40-201ENST00000388090 SHISA4Q96DD7 197 aa3.46□□□□□ -1.86
SNORA40-201ENST00000388090 SRRDQ9UH36 339 aa3.46□□□□□ -1.86
SNORA40-201ENST00000388090 CNOT11Q9UKZ1 510 aaKnown RBP3.46□□□□□ -1.86
SNORA40-201ENST00000388090 FITM1A5D6W6 292 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 CILPO75339 1184 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 CBX7O95931 251 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 FSHBP01225 129 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 PDE6BP35913 854 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 PPP2R3AQ06190 1150 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 SLBPQ14493 270 aaKnown RBP eCLIP3.45□□□□□ -1.86
SNORA40-201ENST00000388090 GAB4Q2WGN9 574 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 CDC37L1Q7L3B6 337 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 CREG2Q8IUH2 290 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 KCT2Q8NC54 265 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 MIPEPQ99797 713 aa3.45□□□□□ -1.86
SNORA40-201ENST00000388090 IRS4O14654 1257 aaPredicted RBP3.44□□□□□ -1.86
SNORA40-201ENST00000388090 N4BP3O15049 544 aa3.44□□□□□ -1.86
SNORA40-201ENST00000388090 GRIN3BO60391 1043 aa3.44□□□□□ -1.86
SNORA40-201ENST00000388090 FAM13AO94988 1023 aa3.44□□□□□ -1.86
SNORA40-201ENST00000388090 TMEFF1Q8IYR6 380 aa3.44□□□□□ -1.86
SNORA40-201ENST00000388090 OXR1Q8N573 874 aa3.44□□□□□ -1.86
SNORA40-201ENST00000388090 LINC01356Q8N9X3 169 aa3.44□□□□□ -1.86
SNORA40-201ENST00000388090 TP53I13Q8NBR0 393 aaPredicted RBP3.44□□□□□ -1.86
SNORA40-201ENST00000388090 FBRSQ9HAH7 460 aa3.44□□□□□ -1.86
SNORA40-201ENST00000388090 GPN3Q9UHW5 284 aaPredicted RBP3.44□□□□□ -1.86
SNORA40-201ENST00000388090 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.43□□□□□ -1.86
SNORA40-201ENST00000388090 K7ESM1 405 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 NME2P22392 152 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 CAP2P40123 477 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 MAGEA10P43363 369 aaPredicted RBP3.43□□□□□ -1.86
SNORA40-201ENST00000388090 KIR3DL1P43629 444 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 GALK1P51570 392 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 HMGA2P52926 109 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 ADAM17P78536 824 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 SRSF3P84103 164 aaKnown RBP3.43□□□□□ -1.86
SNORA40-201ENST00000388090 GRM2Q14416 872 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 SNX17Q15036 470 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 ZFYVE27Q5T4F4 411 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 LETMD1Q6P1Q0 360 aa3.43□□□□□ -1.86
SNORA40-201ENST00000388090 PIWIL2Q8TC59 973 aaKnown RBP3.43□□□□□ -1.86
SNORA40-201ENST00000388090 ZNF507Q8TCN5 953 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms