RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 NT5C1AQ9BXI3 368 aa4.05□□□□□ -1.76
RNU6-541P-201ENST00000384709 COPRSQ9NQ92 184 aa4.05□□□□□ -1.76
RNU6-541P-201ENST00000384709 PRDM10Q9NQV6 1147 aa4.05□□□□□ -1.76
RNU6-541P-201ENST00000384709 KIAA1522Q9P206 1035 aaPredicted RBP4.05□□□□□ -1.76
RNU6-541P-201ENST00000384709 TJP2Q9UDY2 1190 aa4.05□□□□□ -1.76
RNU6-541P-201ENST00000384709 ZC3H7BQ9UGR2 993 aaKnown RBP4.05□□□□□ -1.76
RNU6-541P-201ENST00000384709 ADAMTS1Q9UHI8 967 aa4.05□□□□□ -1.76
RNU6-541P-201ENST00000384709 CCDC9Q9Y3X0 531 aaKnown RBP4.05□□□□□ -1.76
RNU6-541P-201ENST00000384709 UNCXA6NJT0 531 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 SCAMP3O14828 347 aaKnown RBP4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 LEFTY1O75610 366 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 SLITRK5O94991 958 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 LMNB1P20700 586 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 GRK4P32298 578 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 ZNF76P36508 570 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 CDC37L1Q7L3B6 337 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 ARMCX6Q7L4S7 300 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 METTL16Q86W50 562 aaKnown RBP4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 SLITRK4Q8IW52 837 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 SLFN12Q8IYM2 578 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 TMEM87BQ96K49 555 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 BSDC1Q9NW68 430 aaPredicted RBP4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 MAPK8IP1Q9UQF2 711 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 POLR3KQ9Y2Y1 108 aaPredicted RBP4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 SUPT16HQ9Y5B9 1047 aaKnown RBP4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 SNX11Q9Y5W9 270 aa4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 COL17A1Q9UMD9 1497 aaPredicted RBP4.04□□□□□ -1.76
RNU6-541P-201ENST00000384709 PRAMEF27A3QJZ7 478 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 ADAMTS4O75173 837 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 ZNF865P0CJ78 1059 aaPredicted RBP4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 SSTR4P31391 388 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 DIEXFQ68CQ4 756 aaKnown RBP4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 REXO1Q8N1G1 1221 aaKnown RBP4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 TOP6BLQ8N6T0 577 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 GOLM1Q8NBJ4 401 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 NETO1Q8TDF5 533 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 ZNF296Q8WUU4 475 aaPredicted RBP4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 JARID2Q92833 1246 aaPredicted RBP4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 RNF34Q969K3 372 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 MRRFQ96E11 262 aaKnown RBP4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 MISP3Q96FF7 219 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 EHMT1Q9H9B1 1298 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 SSU72Q9NP77 194 aaKnown RBP4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 PCMTD2Q9NV79 361 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 CCDC39Q9UFE4 941 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 GGT7Q9UJ14 662 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 PLAGL2Q9UPG8 496 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 U3KQE9 123 aa4.03□□□□□ -1.76
RNU6-541P-201ENST00000384709 MINDY4BA8MYZ0 360 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 BPNT1O95861 308 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 PGRP06401 933 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 CRKP46108 304 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 ETF1P62495 437 aaKnown RBP4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 SNAP47Q5SQN1 464 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 PRAMEF13Q5VWM6 474 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 VSIG10LQ86VR7 867 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 DNAJB8Q8NHS0 232 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 FBXO27Q8NI29 283 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 PPP1R13LQ8WUF5 828 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 EAF1Q96JC9 268 aaPredicted RBP4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 LGR6Q9HBX8 967 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 GTF2IRD1Q9UHL9 959 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 DDX41Q9UJV9 622 aaKnown RBP4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 VAV3Q9UKW4 847 aa4.02□□□□□ -1.77
RNU6-541P-201ENST00000384709 CNTNAP4Q9C0A0 1308 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 WNT11O96014 354 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 CEACAM5P06731 702 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 RACK1P63244 317 aaKnown RBP4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 PRKCQQ04759 706 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 FAM160A1Q05DH4 1040 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 IFI16Q16666 785 aaKnown RBP4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 NKPD1Q17RQ9 610 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 STK11IPQ8N1F8 1099 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 BCL7CQ8WUZ0 217 aaPredicted RBP4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 VWCEQ96DN2 955 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 PICK1Q9NRD5 415 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 REV1Q9UBZ9 1251 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 CEP131Q9UPN4 1083 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 CORINQ9Y5Q5 1042 aa4.01□□□□□ -1.77
RNU6-541P-201ENST00000384709 TMEM265A0A087WTH1 108 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 SLC22A31A6NKX4 558 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 MEIS3P2A8K0S8 358 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 F6X3S4 739 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 DNAJA2O60884 412 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 HTR3BO95264 441 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 PLCG1P19174 1290 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 KIR3DL1P43629 444 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 CLCN7P51798 805 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 HDLBPQ00341 1268 aaKnown RBP4□□□□□ -1.77
RNU6-541P-201ENST00000384709 CWF19L2Q2TBE0 894 aaKnown RBP4□□□□□ -1.77
RNU6-541P-201ENST00000384709 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 CDCP2Q5VXM1 449 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 ZNF746Q6NUN9 644 aaPredicted RBP4□□□□□ -1.77
RNU6-541P-201ENST00000384709 LETMD1Q6P1Q0 360 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 CBLL1Q75N03 491 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 USP48Q86UV5 1035 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 KIAA0825Q8IV33 1275 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 SPACA3Q8IXA5 215 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 PLD6Q8N2A8 252 aaKnown RBP4□□□□□ -1.77
RNU6-541P-201ENST00000384709 RIN3Q8TB24 985 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms