RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 HSPA1LP34931 641 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 KLHL30Q0D2K2 578 aa18.97■□□□□ 0.63
COL4A3BP-203ENST00000380494 HOXB7P09629 217 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 HAUS3Q68CZ6 603 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 CDC23Q9UJX2 597 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 AGTPBP1Q9UPW5 1226 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 STK38LQ9Y2H1 464 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 NR1I2O75469 434 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 PNOCQ13519 176 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 GBP7Q8N8V2 638 aaPredicted RBP18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 TBC1D31Q96DN5 1066 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 TRIM31Q9BZY9 425 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 Q9H521 79 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 LRRD1A4D1F6 860 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 KRT40Q6A162 431 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 TRIM4Q9C037 500 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 MTMR6Q9Y217 621 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 PARP1P09874 1014 aaKnown RBP18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 ITIH3Q06033 890 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 DSCC1Q9BVC3 393 aa18.96■□□□□ 0.63
COL4A3BP-203ENST00000380494 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 NPATQ14207 1427 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 PFKFB1P16118 471 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 ME3Q16798 604 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 WDR44Q5JSH3 913 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 PIK3AP1Q6ZUJ8 805 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 ARMC9Q7Z3E5 817 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 ODF2LQ9ULJ1 636 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 NCOA5Q9HCD5 579 aaKnown RBP18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 SLC4A8Q2Y0W8 1093 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 BEND3Q5T5X7 828 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 CD109Q6YHK3 1445 aa18.95■□□□□ 0.62
COL4A3BP-203ENST00000380494 CWF19L2Q2TBE0 894 aaKnown RBP18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 ZNF274Q96GC6 653 aaPredicted RBP18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 CMA1P23946 247 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 ARL1P40616 181 aaPredicted RBP18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 CCDC105Q8IYK2 499 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 APPBP2Q92624 585 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 CARD14Q9BXL6 1004 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 CCT5P48643 541 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 GLT8D2Q9H1C3 349 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 CTTNBP2NLQ9P2B4 639 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 KCNJ18B7U540 433 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 KCNJ12Q14500 433 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 LETM2Q2VYF4 491 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 AMFRQ9UKV5 643 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 MYSM1Q5VVJ2 828 aa18.94■□□□□ 0.62
COL4A3BP-203ENST00000380494 GAS8O95995 478 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 LONRF2Q1L5Z9 754 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 STAG1Q8WVM7 1258 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 FAM227BQ96M60 508 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 B4E1Z4 1266 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 KRT15P19012 456 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 TYW1BQ6NUM6 668 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 ACTR5Q9H9F9 607 aaPredicted RBP18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 TRAPPC8Q9Y2L5 1435 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 GUCY2FP51841 1108 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 GRK7Q8WTQ7 553 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 TACO1Q9BSH4 297 aaKnown RBP18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 TXNDC9O14530 226 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 EVI5O60447 810 aa18.93■□□□□ 0.62
COL4A3BP-203ENST00000380494 KRT5P13647 590 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 TCHPQ9BT92 498 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 ABCC4O15439 1325 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 KDM5DQ9BY66 1539 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 A0A1W2PP64 1363 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 GSPT1P15170 499 aaKnown RBP18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 DNM2P50570 870 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 ZNF804AQ7Z570 1209 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 ZSWIM6Q9HCJ5 1215 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 THEGQ9P2T0 379 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 C6orf229H3BNL8 230 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 CCDC170Q8IYT3 715 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 SERTAD1Q9UHV2 236 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 JAK2O60674 1132 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 MBD4O95243 580 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 MORC3Q14149 939 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 TRIM68Q6AZZ1 485 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 KRT25Q7Z3Z0 450 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 TRMT44Q8IYL2 757 aaKnown RBP18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 KBTBD3Q8NAB2 608 aa18.92■□□□□ 0.62
COL4A3BP-203ENST00000380494 TRIM37O94972 964 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 SNX16P57768 344 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 VCX3AQ9NNX9 186 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 MCM9Q9NXL9 1143 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 JRKLQ9Y4A0 524 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 A0A1W2PQ27 194 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 A0A1W2PQ64 194 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 A0A1W2PQD8 194 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 CCNT1O60563 726 aaKnown RBP18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 BCRP11274 1271 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 ATP1A2P50993 1020 aa18.91■□□□□ 0.62
COL4A3BP-203ENST00000380494 CCDC197Q8NCU1 140 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms