RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CYP27B1O15528 508 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 MYO1BO43795 1136 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 ATP5JP18859 108 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 GALNT17Q6IS24 598 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 SAPCD2Q86UD0 394 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 NBPF15Q8N660 670 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 C15orf41Q9Y2V0 281 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 ADGRL3Q9HAR2 1447 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 E2F6O75461 281 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 DHX40Q8IX18 779 aaKnown RBP10.53□□□□□ -0.72
PTPRA-204ENST00000380393 RNF168Q8IYW5 571 aaPredicted RBP10.53□□□□□ -0.72
PTPRA-204ENST00000380393 CABLES1Q8TDN4 633 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 HPCAL4Q9UM19 191 aa10.53□□□□□ -0.72
PTPRA-204ENST00000380393 OPLAHO14841 1288 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 UPP2O95045 317 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 CPA1P15085 419 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 ATP4AP20648 1035 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 PPP1R15BQ5SWA1 713 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 MEX3CQ5U5Q3 659 aaKnown RBP10.52□□□□□ -0.72
PTPRA-204ENST00000380393 CCDC121Q6ZUS5 278 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 CEP57L1Q8IYX8 460 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 ZFAND2BQ8WV99 257 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 DTNBP1Q96EV8 351 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 SPATA32Q96LK8 384 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 INCENPQ9NQS7 918 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 TBC1D7Q9P0N9 293 aa10.52□□□□□ -0.72
PTPRA-204ENST00000380393 GOLGA6L9A6NEM1 432 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 BIN1O00499 593 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 VCAM1P19320 739 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 HSPA4P34932 840 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 OGFOD1Q8N543 542 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 SMCR8Q8TEV9 937 aaPredicted RBP10.52□□□□□ -0.73
PTPRA-204ENST00000380393 GDAP1L1Q96MZ0 367 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 ACTR5Q9H9F9 607 aaPredicted RBP10.52□□□□□ -0.73
PTPRA-204ENST00000380393 UTP6Q9NYH9 597 aaKnown RBP10.52□□□□□ -0.73
PTPRA-204ENST00000380393 TMEM98Q9Y2Y6 226 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 PARP1P09874 1014 aaKnown RBP10.52□□□□□ -0.73
PTPRA-204ENST00000380393 DESP17661 470 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 GJB2P29033 226 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 PDE1AP54750 535 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 ARHGAP45Q92619 1136 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 KIFC2Q96AC6 838 aa10.52□□□□□ -0.73
PTPRA-204ENST00000380393 USP6P35125 1406 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 PPFIA3O75145 1194 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 TUBBP07437 444 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 PDCLQ13371 301 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 SLMAPQ14BN4 828 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 KBTBD12Q3ZCT8 623 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 CEP85Q6P2H3 762 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 CCDC80Q76M96 950 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 HOOK3Q86VS8 718 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 ANKRD44Q8N8A2 993 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 LTV1Q96GA3 475 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-204ENST00000380393 FAM167BQ9BTA0 163 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 TRAIPQ9BWF2 469 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 UBE2OQ9C0C9 1292 aaKnown RBP10.51□□□□□ -0.73
PTPRA-204ENST00000380393 NOD2Q9HC29 1040 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 ZFATQ9P243 1243 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 TFIP11Q9UBB9 837 aaKnown RBP10.51□□□□□ -0.73
PTPRA-204ENST00000380393 A0A1B0GVL5 298 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 EIF4E1BA6NMX2 242 aaKnown RBP10.51□□□□□ -0.73
PTPRA-204ENST00000380393 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-204ENST00000380393 ANP32DO95626 131 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 ME3Q16798 604 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 Q6ZUG5 572 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 TEKT4Q8WW24 435 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 ESYT1Q9BSJ8 1104 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 EBF2Q9HAK2 575 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 ANO10Q9NW15 660 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 CWC25Q9NXE8 425 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-204ENST00000380393 F6X3S4 739 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 MBD4O95243 580 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 DRP2Q13474 957 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 BLMHQ13867 455 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 KARSQ15046 597 aaKnown RBP10.51□□□□□ -0.73
PTPRA-204ENST00000380393 OLFML1Q6UWY5 402 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 IL17RAQ96F46 866 aa10.51□□□□□ -0.73
PTPRA-204ENST00000380393 EDC4Q6P2E9 1401 aaKnown RBP10.5□□□□□ -0.73
PTPRA-204ENST00000380393 MXRA7P84157 204 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 NUGGCQ68CJ6 796 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 DYDC1Q8WWB3 177 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 DHRS1Q96LJ7 313 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 SCAND2PQ9GZW5 306 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-204ENST00000380393 CDC23Q9UJX2 597 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 LIN7AO14910 233 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-204ENST00000380393 LGR5O75473 907 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 SESN3P58005 492 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 TUBB4BP68371 445 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 AKAP17AQ02040 695 aaKnown RBP10.5□□□□□ -0.73
PTPRA-204ENST00000380393 NAA35Q5VZE5 725 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 CCDC83Q8IWF9 413 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 TEKT1Q969V4 418 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 ZNF510Q9Y2H8 683 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 NFE2L2Q16236 605 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 KRT28Q7Z3Y7 464 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 RPAP2Q8IXW5 612 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-204ENST00000380393 NECTIN2Q92692 538 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 ZNF570Q96NI8 536 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 PIDD1Q9HB75 910 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms