RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SCYL3Q8IZE3 742 aa13.96□□□□□ -0.18
DEPDC4-202ENST00000378244 CCDC102AQ96A19 550 aa13.96□□□□□ -0.18
DEPDC4-202ENST00000378244 HHIPL1Q96JK4 782 aa13.96□□□□□ -0.18
DEPDC4-202ENST00000378244 RAD50Q92878 1312 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 IRF6O14896 467 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 GJA5P36382 358 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 ECE1P42892 770 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 TRIM75PA6NK02 468 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 SLC10A3P09131 477 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 PTPRAP18433 802 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 ABCB5Q2M3G0 1257 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 SPRYD7Q5W111 196 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 C16orf86Q6ZW13 317 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 ERO1BQ86YB8 467 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 CLEC10AQ8IUN9 316 aa13.95□□□□□ -0.18
DEPDC4-202ENST00000378244 SIPA1L1O43166 1804 aa13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 ZNF213O14771 459 aa13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 KIF23Q02241 960 aaPredicted RBP13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 RRP12Q5JTH9 1297 aaKnown RBP13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 HOMEZQ8IX15 550 aa13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 WNK4Q96J92 1243 aa13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 DSCC1Q9BVC3 393 aa13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 SWAP70Q9UH65 585 aa13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 ZBTB21Q9ULJ3 1066 aa13.94□□□□□ -0.18
DEPDC4-202ENST00000378244 SPDYE5A6NIY4 337 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 ASNSP08243 561 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 AKR1B1P15121 316 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 NOGQ13253 232 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 ALX1Q15699 326 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 DDX60LQ5H9U9 1706 aaKnown RBP13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 SLC3A2P08195 630 aaKnown RBP13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 PDE4BQ07343 736 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 SEPT2Q15019 361 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 FAM47AQ5JRC9 791 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 CABP5Q9NP86 173 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 TACC3Q9Y6A5 838 aa13.93□□□□□ -0.18
DEPDC4-202ENST00000378244 RASA1P20936 1047 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 SPP2Q13103 211 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 DGKZQ13574 1117 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 IMMTQ16891 758 aaKnown RBP13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 NOL9Q5SY16 702 aaKnown RBP13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 ZNF444Q8N0Y2 327 aaPredicted RBP13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 OTOFQ9HC10 1997 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 ATP2B2Q01814 1243 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 PPATQ06203 517 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 ZYXQ15942 572 aaKnown RBP13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 TBC1D10CQ8IV04 446 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 LSG1Q9H089 658 aaKnown RBP13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 NBPF3Q9H094 633 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 CTNNA3Q9UI47 895 aa13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 RBM8AQ9Y5S9 174 aaKnown RBP13.92□□□□□ -0.18
DEPDC4-202ENST00000378244 ZBTB48P10074 688 aaPredicted RBP13.91□□□□□ -0.18
DEPDC4-202ENST00000378244 MAP4K1Q92918 833 aa13.91□□□□□ -0.18
DEPDC4-202ENST00000378244 TAF6LQ9Y6J9 622 aa13.91□□□□□ -0.18
DEPDC4-202ENST00000378244 USP17L5A8MUK1 530 aa13.91□□□□□ -0.18
DEPDC4-202ENST00000378244 MFSD6Q6ZSS7 791 aa13.91□□□□□ -0.18
DEPDC4-202ENST00000378244 ZNF287Q9HBT7 754 aa13.91□□□□□ -0.18
DEPDC4-202ENST00000378244 ROBO3Q96MS0 1386 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 CYP21A2P08686 494 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 TFAP4Q01664 338 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 NKX2-3Q8TAU0 364 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 ANAPC4Q9UJX5 808 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 TSPY2A6NKD2 308 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 TSPY3P0CV98 308 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 TSPY8P0CW00 308 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 GUCY1A2P33402 732 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 PPIL2Q13356 520 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 AKNAD1Q5T1N1 836 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 ZNF280CQ8ND82 737 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 ACER1Q8TDN7 264 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 MS4A4AQ96JQ5 239 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 CCDC17Q96LX7 622 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 AFG3L2Q9Y4W6 797 aa13.9□□□□□ -0.18
DEPDC4-202ENST00000378244 ZMYM6O95789 1325 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 CCL15-CCL14A0A0B4J2E2 113 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 RAD21O60216 631 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 NMT2O60551 498 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 MAP2K2P36507 400 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 HMGCS2P54868 508 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 MTMR2Q13614 643 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 CCL15Q16663 113 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 TMEM179Q6ZVK1 233 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 FEZ1Q99689 392 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 NEDD4P46934 1319 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 GTF2A2P52657 109 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.89□□□□□ -0.19
DEPDC4-202ENST00000378244 B4E1Z4 1266 aa13.88□□□□□ -0.19
DEPDC4-202ENST00000378244 ICA1Q05084 483 aa13.88□□□□□ -0.19
DEPDC4-202ENST00000378244 GADL1Q6ZQY3 521 aa13.88□□□□□ -0.19
DEPDC4-202ENST00000378244 BRI3BPQ8WY22 251 aa13.88□□□□□ -0.19
DEPDC4-202ENST00000378244 PTPN18Q99952 460 aa13.88□□□□□ -0.19
DEPDC4-202ENST00000378244 ZKSCAN3Q9BRR0 538 aa13.88□□□□□ -0.19
DEPDC4-202ENST00000378244 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms