RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 FBXW7Q969H0 707 aa19.45■□□□□ 0.7
PHF1-202ENST00000374516 USP17L12C9JPN9 530 aa19.45■□□□□ 0.7
PHF1-202ENST00000374516 USP17L21D6R901 530 aa19.45■□□□□ 0.7
PHF1-202ENST00000374516 CTR9Q6PD62 1173 aa19.45■□□□□ 0.7
PHF1-202ENST00000374516 SDF4Q9BRK5 362 aa19.45■□□□□ 0.7
PHF1-202ENST00000374516 L2HGDHQ9H9P8 463 aa19.45■□□□□ 0.7
PHF1-202ENST00000374516 POLRMTO00411 1230 aaKnown RBP19.44■□□□□ 0.7
PHF1-202ENST00000374516 SART3Q15020 963 aaKnown RBP19.44■□□□□ 0.7
PHF1-202ENST00000374516 NTRK3Q16288 839 aa19.44■□□□□ 0.7
PHF1-202ENST00000374516 DZIP1Q86YF9 867 aaKnown RBP19.44■□□□□ 0.7
PHF1-202ENST00000374516 CCDC82Q8N4S0 544 aa19.44■□□□□ 0.7
PHF1-202ENST00000374516 ALG1Q9BT22 464 aa19.44■□□□□ 0.7
PHF1-202ENST00000374516 ZNF446Q9NWS9 450 aa19.44■□□□□ 0.7
PHF1-202ENST00000374516 PCDHA7Q9UN72 937 aa19.44■□□□□ 0.7
PHF1-202ENST00000374516 PDS5AQ29RF7 1337 aaKnown RBP19.44■□□□□ 0.7
PHF1-202ENST00000374516 ERICH2A1L162 156 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 RANBP6O60518 1105 aaKnown RBP19.43■□□□□ 0.7
PHF1-202ENST00000374516 GRIK5Q16478 980 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 SLC4A8Q2Y0W8 1093 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 SYNE3Q6ZMZ3 975 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 CMTR1Q8N1G2 835 aaKnown RBP19.43■□□□□ 0.7
PHF1-202ENST00000374516 BRIP1Q9BX63 1249 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 ANAPC4Q9UJX5 808 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 CDKL5O76039 1030 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 UFL1O94874 794 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 ZNF827Q17R98 1081 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 ADALQ6DHV7 355 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 CPLX2Q6PUV4 134 aaKnown RBP19.43■□□□□ 0.7
PHF1-202ENST00000374516 ESR2Q92731 530 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 RBM17Q96I25 401 aaKnown RBP19.43■□□□□ 0.7
PHF1-202ENST00000374516 UBAC1Q9BSL1 405 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 CHD4Q14839 1912 aa19.43■□□□□ 0.7
PHF1-202ENST00000374516 KIF28PB7ZC32 967 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 IARSP41252 1262 aaKnown RBP19.42■□□□□ 0.7
PHF1-202ENST00000374516 MRPS27Q92552 414 aaKnown RBP19.42■□□□□ 0.7
PHF1-202ENST00000374516 BAZ2AQ9UIF9 1905 aaKnown RBP19.42■□□□□ 0.7
PHF1-202ENST00000374516 A0A0U1RQG5 324 aaPredicted RBP19.42■□□□□ 0.7
PHF1-202ENST00000374516 APBA3O96018 575 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 ERCC6LQ2NKX8 1250 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 CCDC93Q567U6 631 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 ARMCX5Q6P1M9 558 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 NUP133Q8WUM0 1156 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 PPP1R13BQ96KQ4 1090 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 SLC26A6Q9BXS9 759 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 DCP1AQ9NPI6 582 aaPredicted RBP19.42■□□□□ 0.7
PHF1-202ENST00000374516 KIAA1468Q9P260 1216 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 MYH13Q9UKX3 1938 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 TIAM2Q8IVF5 1701 aa19.42■□□□□ 0.7
PHF1-202ENST00000374516 A0A1B0GVL5 298 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 PSDA5PKW4 1024 aaPredicted RBP19.41■□□□□ 0.7
PHF1-202ENST00000374516 LDHBP07195 334 aaKnown RBP19.41■□□□□ 0.7
PHF1-202ENST00000374516 H2AFXP16104 143 aaPredicted RBP19.41■□□□□ 0.7
PHF1-202ENST00000374516 DIXDC1Q155Q3 683 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 CRNKL1Q9BZJ0 848 aaKnown RBP19.41■□□□□ 0.7
PHF1-202ENST00000374516 XPO4Q9C0E2 1151 aaKnown RBP19.41■□□□□ 0.7
PHF1-202ENST00000374516 TNKSO95271 1327 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 CYP2D6P10635 497 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 NDUFA8P51970 172 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 SYT10Q6XYQ8 523 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 ZNF804AQ7Z570 1209 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 CCDC150Q8NCX0 1101 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 BPIFA3Q9BQP9 254 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 RTEL1Q9NZ71 1219 aa19.41■□□□□ 0.7
PHF1-202ENST00000374516 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 BMS1Q14692 1282 aaKnown RBP19.4■□□□□ 0.7
PHF1-202ENST00000374516 DPCR1Q3MIW9 517 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 SPTY2D1Q68D10 685 aaPredicted RBP19.4■□□□□ 0.7
PHF1-202ENST00000374516 WDR66Q8TBY9 1149 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 IFNKQ9P0W0 207 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 CLIC4Q9Y696 253 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 SMC2O95347 1197 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 KIF23Q02241 960 aaPredicted RBP19.4■□□□□ 0.7
PHF1-202ENST00000374516 KRT40Q6A162 431 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 TMC6Q7Z403 805 aa19.4■□□□□ 0.7
PHF1-202ENST00000374516 CCDC66A2RUB6 948 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 SFPQP23246 707 aaKnown RBP eCLIP19.39■□□□□ 0.69
PHF1-202ENST00000374516 GUCY1A2P33402 732 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 KCNJ6P48051 423 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 ZRSR1Q15695 479 aaKnown RBP19.39■□□□□ 0.69
PHF1-202ENST00000374516 RTN1Q16799 776 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 COL23A1Q86Y22 540 aaPredicted RBP19.39■□□□□ 0.69
PHF1-202ENST00000374516 ST7Q9NRC1 585 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 GGA1Q9UJY5 639 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 BBOX1O75936 387 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 TUBB4AP04350 444 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 FAM193AP78312 1265 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 SSRP1Q08945 709 aaKnown RBP19.39■□□□□ 0.69
PHF1-202ENST00000374516 SEC23AQ15436 765 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 ZNF654Q8IZM8 581 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 TMTC2Q8N394 836 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 ENAHQ8N8S7 591 aaPredicted RBP19.39■□□□□ 0.69
PHF1-202ENST00000374516 LINC00301Q8NCQ3 95 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 CD209Q9NNX6 404 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 POLLQ9UGP5 575 aa19.39■□□□□ 0.69
PHF1-202ENST00000374516 MYSM1Q5VVJ2 828 aa19.38■□□□□ 0.69
PHF1-202ENST00000374516 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
PHF1-202ENST00000374516 LRRN4CLQ8ND94 238 aa19.38■□□□□ 0.69
PHF1-202ENST00000374516 ZSCAN10Q96SZ4 725 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms