RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TMC4Q7Z404 712 aa14.01□□□□□ -0.17
HMGCL-202ENST00000374487 JDP2Q8WYK2 163 aa14.01□□□□□ -0.17
HMGCL-202ENST00000374487 FAM84BQ96KN1 310 aaPredicted RBP14.01□□□□□ -0.17
HMGCL-202ENST00000374487 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
HMGCL-202ENST00000374487 DNAJC25Q9H1X3 360 aa14.01□□□□□ -0.17
HMGCL-202ENST00000374487 GGA1Q9UJY5 639 aa14.01□□□□□ -0.17
HMGCL-202ENST00000374487 AP5Z1O43299 807 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 PPARAQ07869 468 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 SSRP1Q08945 709 aaKnown RBP14□□□□□ -0.17
HMGCL-202ENST00000374487 WTAPQ15007 396 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 ADGRA1Q86SQ6 560 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 TMTC2Q8N394 836 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 SDR42E1Q8WUS8 393 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 SDF4Q9BRK5 362 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 ZKSCAN3Q9BRR0 538 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 PODXL2Q9NZ53 605 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 A0A1W2PQ27 194 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 A0A1W2PQ64 194 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 A0A1W2PQD8 194 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 GOLGA6L6A8MZA4 724 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 KIF28PB7ZC32 967 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 CXCL9Q07325 125 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 ANO1Q5XXA6 986 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 KRT40Q6A162 431 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 NIM1KQ8IY84 436 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 ENGASEQ8NFI3 743 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 ZNF830Q96NB3 372 aaPredicted RBP14□□□□□ -0.17
HMGCL-202ENST00000374487 UBAC1Q9BSL1 405 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 SLC26A6Q9BXS9 759 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 TACC3Q9Y6A5 838 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 DICER1Q9UPY3 1922 aaKnown RBP14□□□□□ -0.17
HMGCL-202ENST00000374487 XDHP47989 1333 aa14□□□□□ -0.17
HMGCL-202ENST00000374487 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.99□□□□□ -0.17
HMGCL-202ENST00000374487 A0A1B0GVL5 298 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 SHTN1A0MZ66 631 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 NTRK3Q16288 839 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 WASF1Q92558 559 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 ANKRD2Q9GZV1 360 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 STX1AQ16623 288 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 SPC24Q8NBT2 197 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 SUPT20HQ8NEM7 779 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 ESR2Q92731 530 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 TTC12Q9H892 705 aaPredicted RBP13.99□□□□□ -0.17
HMGCL-202ENST00000374487 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
HMGCL-202ENST00000374487 DOCK2Q92608 1830 aa13.99□□□□□ -0.17
HMGCL-202ENST00000374487 CCDC196A0A1B0GTZ2 297 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 GOLGA6L19H0YKK7 550 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 SEMA3EO15041 775 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
HMGCL-202ENST00000374487 TPM3P06753 285 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 GRIPAP1Q4V328 841 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 TRIM22Q8IYM9 498 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 FMR1NBQ8N0W7 255 aaPredicted RBP13.98□□□□□ -0.17
HMGCL-202ENST00000374487 MTA3Q9BTC8 594 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
HMGCL-202ENST00000374487 ZNRF3Q9ULT6 936 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
HMGCL-202ENST00000374487 ECE2O60344 883 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 IFNAR1P17181 557 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 HIBADHP31937 336 aaKnown RBP13.98□□□□□ -0.17
HMGCL-202ENST00000374487 NDUFA8P51970 172 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 ZRSR1Q15695 479 aaKnown RBP13.98□□□□□ -0.17
HMGCL-202ENST00000374487 RTN1Q16799 776 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 FBXO33Q7Z6M2 555 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 RIOK1Q9BRS2 568 aaKnown RBP13.98□□□□□ -0.17
HMGCL-202ENST00000374487 TRIM5Q9C035 493 aa13.98□□□□□ -0.17
HMGCL-202ENST00000374487 FMNL1O95466 1100 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-202ENST00000374487 TDRD7Q8NHU6 1098 aaKnown RBP13.97□□□□□ -0.17
HMGCL-202ENST00000374487 NUP133Q8WUM0 1156 aa13.97□□□□□ -0.17
HMGCL-202ENST00000374487 MXD3Q9BW11 206 aa13.97□□□□□ -0.17
HMGCL-202ENST00000374487 ANO10Q9NW15 660 aa13.97□□□□□ -0.17
HMGCL-202ENST00000374487 STK36Q9NRP7 1315 aa13.97□□□□□ -0.17
HMGCL-202ENST00000374487 MYH15Q9Y2K3 1946 aa13.97□□□□□ -0.17
HMGCL-202ENST00000374487 ATP2B4P23634 1241 aa13.96□□□□□ -0.17
HMGCL-202ENST00000374487 EIF6P56537 245 aaKnown RBP13.96□□□□□ -0.17
HMGCL-202ENST00000374487 DYNLL1P63167 89 aaKnown RBP13.96□□□□□ -0.17
HMGCL-202ENST00000374487 SLC39A14Q15043 492 aa13.96□□□□□ -0.17
HMGCL-202ENST00000374487 SAFBQ15424 915 aaKnown RBP eCLIP13.96□□□□□ -0.17
HMGCL-202ENST00000374487 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
HMGCL-202ENST00000374487 JMYQ8N9B5 988 aa13.96□□□□□ -0.17
HMGCL-202ENST00000374487 ANAPC4Q9UJX5 808 aa13.96□□□□□ -0.17
HMGCL-202ENST00000374487 BECN2A8MW95 431 aa13.96□□□□□ -0.18
HMGCL-202ENST00000374487 PSMD14O00487 310 aa13.96□□□□□ -0.18
HMGCL-202ENST00000374487 MARCKSP29966 332 aaPredicted RBP13.96□□□□□ -0.18
HMGCL-202ENST00000374487 EPS15P42566 896 aa13.96□□□□□ -0.18
HMGCL-202ENST00000374487 CHAF1AQ13111 956 aaPredicted RBP13.96□□□□□ -0.18
HMGCL-202ENST00000374487 NAT10Q9H0A0 1025 aaKnown RBP13.96□□□□□ -0.18
HMGCL-202ENST00000374487 JAG2Q9Y219 1238 aa13.96□□□□□ -0.18
HMGCL-202ENST00000374487 ZC3H4Q9UPT8 1303 aaKnown RBP13.96□□□□□ -0.18
HMGCL-202ENST00000374487 COL1A1P02452 1464 aaPredicted RBP13.96□□□□□ -0.18
HMGCL-202ENST00000374487 CMA1P23946 247 aa13.95□□□□□ -0.18
HMGCL-202ENST00000374487 U2AF2P26368 475 aaKnown RBP eCLIP13.95□□□□□ -0.18
HMGCL-202ENST00000374487 SCNN1DP51172 638 aa13.95□□□□□ -0.18
HMGCL-202ENST00000374487 ZNF654Q8IZM8 581 aa13.95□□□□□ -0.18
HMGCL-202ENST00000374487 FANCBQ8NB91 859 aa13.95□□□□□ -0.18
HMGCL-202ENST00000374487 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms