RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GRAPLQ8TC17 118 aaPredicted RBP18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 THSD7AQ9UPZ6 1657 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 PPP6R2O75170 966 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 HSPA1LP34931 641 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 KIAA1524Q8TCG1 905 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 TAF1LQ8IZX4 1826 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 CAVIN2O95810 425 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 TROAPQ12815 778 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 PKN1Q16512 942 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 FILIP1Q7Z7B0 1213 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 JMYQ8N9B5 988 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 SH3RF3Q8TEJ3 882 aaPredicted RBP18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 IRS2Q9Y4H2 1338 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 NID2Q14112 1375 aa18.42■□□□□ 0.54
CNKSR1-202ENST00000374253 VEGFAP15692 232 aaPredicted RBP18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 TSPY2A6NKD2 308 aa18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 LDHBP07195 334 aaKnown RBP18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 GPSM2P81274 684 aa18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 RESP18Q5W5W9 173 aa18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 PDILTQ8N807 584 aa18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 CACTINQ8WUQ7 758 aaKnown RBP18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 RPGRQ92834 1020 aaKnown RBP18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 HPSEQ9Y251 543 aa18.41■□□□□ 0.54
CNKSR1-202ENST00000374253 UQCRHLA0A096LP55 91 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 UQCRHP07919 91 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 USP5P45974 858 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 KCNH3Q9ULD8 1083 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 MYH6P13533 1939 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 WNT7AO00755 349 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 RGL2O15211 777 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 FUT2Q10981 343 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 USP49Q70CQ1 688 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 KRI1Q8N9T8 703 aaKnown RBP18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 NAT10Q9H0A0 1025 aaKnown RBP18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
CNKSR1-202ENST00000374253 GYS1P13807 737 aa18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 RNF26Q9BY78 433 aaPredicted RBP18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 FOXP1Q9H334 677 aaPredicted RBP18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 CUTAO60888 179 aa18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 UFL1O94874 794 aa18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 TRIM37O94972 964 aa18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 METTL16Q86W50 562 aaKnown RBP18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 GRAMD1CQ8IYS0 662 aa18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 SRBD1Q8N5C6 995 aaKnown RBP18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 CNNM3Q8NE01 707 aa18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 TGFBRAP1Q8WUH2 860 aa18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 MTA3Q9BTC8 594 aa18.39■□□□□ 0.53
CNKSR1-202ENST00000374253 NLRP12P59046 1061 aa18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 FOXP4Q8IVH2 680 aaPredicted RBP18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 ATP8A2Q9NTI2 1148 aa18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 XDHP47989 1333 aa18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 ADAMTS3O15072 1205 aa18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 SERPINB2P05120 415 aa18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 FGRP09769 529 aa18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 RBM10P98175 930 aaKnown RBP18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 MAPKAPK5Q8IW41 473 aa18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 FBXO2Q9UK22 296 aaPredicted RBP18.38■□□□□ 0.53
CNKSR1-202ENST00000374253 SBF2Q86WG5 1849 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 LY75O60449 1722 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 LMOD1P29536 600 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 TFAP4Q01664 338 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 RILPL1Q5EBL4 403 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 SARM1Q6SZW1 724 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 BCL11BQ9C0K0 894 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 ARPP21Q9UBL0 812 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 USP17L3A6NCW0 530 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 USP17L4A6NCW7 530 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 POLR2DO15514 142 aaKnown RBP18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 SMC2O95347 1197 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 TPM3P06753 285 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 PTPN21Q16825 1174 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 HSP90AA4PQ58FG1 418 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 TMTC3Q6ZXV5 915 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 USP17L1Q7RTZ2 530 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 TSC1Q92574 1164 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 SPTLC3Q9NUV7 552 aa18.37■□□□□ 0.53
CNKSR1-202ENST00000374253 TPM2P07951 284 aa18.36■□□□□ 0.53
CNKSR1-202ENST00000374253 PDE4BQ07343 736 aa18.36■□□□□ 0.53
CNKSR1-202ENST00000374253 KRBA2Q6ZNG9 492 aa18.36■□□□□ 0.53
CNKSR1-202ENST00000374253 CTCFLQ8NI51 663 aaPredicted RBP18.36■□□□□ 0.53
CNKSR1-202ENST00000374253 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-202ENST00000374253 ORC4O43929 436 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 ATP1A3P13637 1013 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 RCAN1P53805 252 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 SPTY2D1Q68D10 685 aaPredicted RBP18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 RASGRP2Q7LDG7 609 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 ZNF804AQ7Z570 1209 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 CSRNP2Q9H175 543 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 QTRT2Q9H974 415 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 IFNKQ9P0W0 207 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 LEMD3Q9Y2U8 911 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms