RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
PUM1-202ENST00000373741 RFX7Q2KHR2 1363 aa13.36□□□□□ -0.27
PUM1-202ENST00000373741 MARCKSP29966 332 aaPredicted RBP13.35□□□□□ -0.27
PUM1-202ENST00000373741 DCP1AQ9NPI6 582 aaPredicted RBP13.35□□□□□ -0.27
PUM1-202ENST00000373741 EXOSC10Q01780 885 aaKnown RBP13.35□□□□□ -0.27
PUM1-202ENST00000373741 EYA3Q99504 573 aa13.35□□□□□ -0.27
PUM1-202ENST00000373741 KAT14Q9H8E8 782 aa13.35□□□□□ -0.27
PUM1-202ENST00000373741 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
PUM1-202ENST00000373741 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
PUM1-202ENST00000373741 TSGA10IPQ3SY00 556 aa13.35□□□□□ -0.27
PUM1-202ENST00000373741 VEZTQ9HBM0 779 aa13.35□□□□□ -0.27
PUM1-202ENST00000373741 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
PUM1-202ENST00000373741 FILIP1Q7Z7B0 1213 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 BCS1LQ9Y276 419 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 PTPN14Q15678 1187 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 CCAR2Q8N163 923 aaKnown RBP13.34□□□□□ -0.27
PUM1-202ENST00000373741 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 RGS17Q9UGC6 210 aaPredicted RBP13.34□□□□□ -0.27
PUM1-202ENST00000373741 PAPPAQ13219 1627 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 USP17L3A6NCW0 530 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 USP17L4A6NCW7 530 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 SEMA3EO15041 775 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 NAA30Q147X3 362 aaPredicted RBP13.34□□□□□ -0.27
PUM1-202ENST00000373741 CTR9Q6PD62 1173 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 USP17L1Q7RTZ2 530 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 ZNF654Q8IZM8 581 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 ATP6V0A2Q9Y487 856 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 SMTNL1A8MU46 457 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 GOLGA8HP0CJ92 632 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 SDF4Q9BRK5 362 aa13.34□□□□□ -0.27
PUM1-202ENST00000373741 ARGLU1Q9NWB6 273 aaPredicted RBP13.34□□□□□ -0.27
PUM1-202ENST00000373741 CEP135Q66GS9 1140 aa13.33□□□□□ -0.28
PUM1-202ENST00000373741 ZNF274Q96GC6 653 aaPredicted RBP13.33□□□□□ -0.28
PUM1-202ENST00000373741 V9GY48 417 aaPredicted RBP13.33□□□□□ -0.28
PUM1-202ENST00000373741 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
PUM1-202ENST00000373741 CDC27P30260 824 aa13.33□□□□□ -0.28
PUM1-202ENST00000373741 KCNB2Q92953 911 aa13.33□□□□□ -0.28
PUM1-202ENST00000373741 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
PUM1-202ENST00000373741 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
PUM1-202ENST00000373741 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
PUM1-202ENST00000373741 RTL9Q8NET4 1388 aa13.33□□□□□ -0.28
PUM1-202ENST00000373741 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
PUM1-202ENST00000373741 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.28
PUM1-202ENST00000373741 SLURP2P0DP57 97 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 ZNF397Q8NF99 534 aaPredicted RBP13.32□□□□□ -0.28
PUM1-202ENST00000373741 ZNF396Q96N95 335 aaPredicted RBP13.32□□□□□ -0.28
PUM1-202ENST00000373741 CRAMP1Q96RY5 1269 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 RIOK1Q9BRS2 568 aaKnown RBP13.32□□□□□ -0.28
PUM1-202ENST00000373741 CPVLQ9H3G5 476 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 POLD1P28340 1107 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 TTC6Q86TZ1 520 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 TDRD7Q8NHU6 1098 aaKnown RBP13.32□□□□□ -0.28
PUM1-202ENST00000373741 ERCC4Q92889 916 aaPredicted RBP13.32□□□□□ -0.28
PUM1-202ENST00000373741 CNKSR1Q969H4 720 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 SCAND2PQ9GZW5 306 aaPredicted RBP13.32□□□□□ -0.28
PUM1-202ENST00000373741 CWC15Q9P013 229 aaKnown RBP13.32□□□□□ -0.28
PUM1-202ENST00000373741 PAXBP1Q9Y5B6 917 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 CCDC196A0A1B0GTZ2 297 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 C10orf67Q8IYJ2 551 aa13.32□□□□□ -0.28
PUM1-202ENST00000373741 ZSCAN10Q96SZ4 725 aaPredicted RBP13.32□□□□□ -0.28
PUM1-202ENST00000373741 CLRN2A0PK11 232 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 CLEC17AQ6ZS10 378 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 MYH3P11055 1940 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
PUM1-202ENST00000373741 CTDNEP1O95476 244 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 XBP1P17861 261 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 CLEC10AQ8IUN9 316 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 ZNF384Q8TF68 577 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 DACT1Q9NYF0 836 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 PLCD1P51178 756 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 UBE2HP62256 183 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
PUM1-202ENST00000373741 GPATCH11Q8N954 259 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 KIAA1524Q8TCG1 905 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 TNMDQ9H2S6 317 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 TEKT1Q969V4 418 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 LY9Q9HBG7 655 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 ATP8A2Q9NTI2 1148 aa13.31□□□□□ -0.28
PUM1-202ENST00000373741 TERF2Q15554 542 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 ISM2Q6H9L7 571 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 OGFOD1Q8N543 542 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 USP28Q96RU2 1077 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 GJA3Q9Y6H8 435 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 GTF2A1P52655 376 aaPredicted RBP13.3□□□□□ -0.28
PUM1-202ENST00000373741 LRMPQ12912 555 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 KRT40Q6A162 431 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 ARPP21Q9UBL0 812 aaPredicted RBP13.3□□□□□ -0.28
PUM1-202ENST00000373741 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
PUM1-202ENST00000373741 SPEF2Q9C093 1822 aa13.3□□□□□ -0.28
PUM1-202ENST00000373741 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms