RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 AZI2Q9H6S1 392 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 MYOM2P54296 1465 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 ERVK-7P63135 1459 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 A0A1B0GVL5 298 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 WDR44Q5JSH3 913 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 PPP4R4Q6NUP7 873 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 CEP112Q8N8E3 955 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 CNKSR1Q969H4 720 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 INTS4Q96HW7 963 aaKnown RBP10.96□□□□□ -0.66
COL4A6-202ENST00000372216 ARHGEF35A5YM69 484 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 ROBO2Q9HCK4 1378 aa10.96□□□□□ -0.66
COL4A6-202ENST00000372216 TTC36A6NLP5 189 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 E7EVH7 732 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 PCCAP05165 728 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 CKAP4Q07065 602 aaKnown RBP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 PDE4DQ08499 809 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 TTC38Q5R3I4 469 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 GADL1Q6ZQY3 521 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 CUL4BQ13620 913 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 C6orf163Q5TEZ5 329 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 KIAA0825Q8IV33 1275 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 LMBR1Q8WVP7 490 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 ZNF335Q9H4Z2 1342 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 CALUO43852 315 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 DKC1O60832 514 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 GTF2F1P35269 517 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 SATB1Q01826 763 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 CGNQ9P2M7 1197 aaKnown RBP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 RASAL2Q9UJF2 1139 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 ZBTB16Q05516 673 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 NONOQ15233 471 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 KRT25Q7Z3Z0 450 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 SESTD1Q86VW0 696 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 PHKBQ93100 1093 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 TRAF5O00463 557 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 GAS8O95995 478 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 ATP5JP18859 108 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 BTDP43251 543 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 RNASE9P60153 205 aaKnown RBP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 CFAP157Q5JU67 520 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 LLPHQ9BRT6 129 aaKnown RBP10.95□□□□□ -0.66
COL4A6-202ENST00000372216 KCNK9Q9NPC2 374 aa10.95□□□□□ -0.66
COL4A6-202ENST00000372216 SGSM2O43147 1006 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 TACC1O75410 805 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 ATL3Q6DD88 541 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 TBC1D7Q9P0N9 293 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 EXOC7Q9UPT5 735 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 ATP7BP35670 1465 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 FRMPD2Q68DX3 1309 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-202ENST00000372216 ZBTB24O43167 697 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-202ENST00000372216 TSTA3Q13630 321 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-202ENST00000372216 PPP1R7Q15435 360 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 DNAJC21Q5F1R6 531 aaKnown RBP10.94□□□□□ -0.66
COL4A6-202ENST00000372216 ANO1Q5XXA6 986 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 METTL13Q8N6R0 699 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 MBD5Q9P267 1494 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 RAD51AP2Q09MP3 1159 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 CALCRLQ16602 461 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 LRRC24Q50LG9 513 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 BLMP54132 1417 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-202ENST00000372216 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 SKILP12757 684 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 FAM160A1Q05DH4 1040 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 SF3A3Q12874 501 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL4A6-202ENST00000372216 CNNM4Q6P4Q7 775 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 JAKMIP2Q96AA8 810 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 KIF24Q5T7B8 1368 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 KRT83P78385 493 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 GREM2Q9H772 168 aa10.94□□□□□ -0.66
COL4A6-202ENST00000372216 E7EWF7 191 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 OTUD7BQ6GQQ9 843 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 ARHGEF25Q86VW2 580 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 CDAN1Q8IWY9 1227 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 DIS3L2Q8IYB7 885 aaKnown RBP10.93□□□□□ -0.66
COL4A6-202ENST00000372216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL4A6-202ENST00000372216 CCDC42Q96M95 316 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 MED10Q9BTT4 135 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 DSCC1Q9BVC3 393 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 SEC24BO95487 1268 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 IFT81Q8WYA0 676 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 GOLGA1Q92805 767 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 PPP1R9BQ96SB3 815 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 USTQ9Y2C2 406 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 M0QZ92 97 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-202ENST00000372216 UNC5CLQ8IV45 518 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 DDX12PQ92771 950 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 EDC3Q96F86 508 aaKnown RBP10.93□□□□□ -0.66
COL4A6-202ENST00000372216 KCNQ4P56696 695 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 TRPC3Q13507 836 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 CCDC186Q7Z3E2 898 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 SNX29Q8TEQ0 813 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 KCNJ14Q9UNX9 436 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 WDR17Q8IZU2 1322 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms