RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
EDF1-202ENST00000371648 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
EDF1-202ENST00000371648 PI4KBQ9UBF8 816 aa17.43■□□□□ 0.38
EDF1-202ENST00000371648 BIN2Q9UBW5 565 aaPredicted RBP17.43■□□□□ 0.38
EDF1-202ENST00000371648 SAP30BPQ9UHR5 308 aaKnown RBP17.43■□□□□ 0.38
EDF1-202ENST00000371648 SLC45A1Q9Y2W3 748 aa17.43■□□□□ 0.38
EDF1-202ENST00000371648 SPP2Q13103 211 aa17.42■□□□□ 0.38
EDF1-202ENST00000371648 RRP1BQ14684 758 aaKnown RBP17.42■□□□□ 0.38
EDF1-202ENST00000371648 LRRFIP1Q32MZ4 808 aaKnown RBP17.42■□□□□ 0.38
EDF1-202ENST00000371648 SLFNL1Q499Z3 407 aa17.42■□□□□ 0.38
EDF1-202ENST00000371648 CHD1LQ86WJ1 897 aa17.42■□□□□ 0.38
EDF1-202ENST00000371648 CRNKL1Q9BZJ0 848 aaKnown RBP17.42■□□□□ 0.38
EDF1-202ENST00000371648 PALD1Q9ULE6 856 aa17.42■□□□□ 0.38
EDF1-202ENST00000371648 GABRQQ9UN88 632 aa17.42■□□□□ 0.38
EDF1-202ENST00000371648 AGTPBP1Q9UPW5 1226 aa17.42■□□□□ 0.38
EDF1-202ENST00000371648 FLT1P17948 1338 aa17.42■□□□□ 0.38
EDF1-202ENST00000371648 TCRBV5S4A2TA0A5A2 114 aa17.41■□□□□ 0.38
EDF1-202ENST00000371648 CAP2P40123 477 aa17.41■□□□□ 0.38
EDF1-202ENST00000371648 NUCB1Q02818 461 aa17.41■□□□□ 0.38
EDF1-202ENST00000371648 UBE3CQ15386 1083 aa17.41■□□□□ 0.38
EDF1-202ENST00000371648 TREML2Q5T2D2 321 aa17.41■□□□□ 0.38
EDF1-202ENST00000371648 CRACR2BQ8N4Y2 399 aaPredicted RBP17.41■□□□□ 0.38
EDF1-202ENST00000371648 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
EDF1-202ENST00000371648 PI4K2BQ8TCG2 481 aa17.41■□□□□ 0.38
EDF1-202ENST00000371648 HLA-DOAP06340 250 aa17.4■□□□□ 0.38
EDF1-202ENST00000371648 CCL5P13501 91 aa17.4■□□□□ 0.38
EDF1-202ENST00000371648 PDE1AP54750 535 aa17.4■□□□□ 0.38
EDF1-202ENST00000371648 FOXP4Q8IVH2 680 aaPredicted RBP17.4■□□□□ 0.38
EDF1-202ENST00000371648 ZNF280CQ8ND82 737 aa17.4■□□□□ 0.38
EDF1-202ENST00000371648 RIOK1Q9BRS2 568 aaKnown RBP17.4■□□□□ 0.38
EDF1-202ENST00000371648 FSD1Q9BTV5 496 aa17.4■□□□□ 0.38
EDF1-202ENST00000371648 ARMT1Q9H993 441 aa17.4■□□□□ 0.38
EDF1-202ENST00000371648 MYH7P12883 1935 aa17.4■□□□□ 0.38
EDF1-202ENST00000371648 CDK5RAP2Q96SN8 1893 aa17.39■□□□□ 0.38
EDF1-202ENST00000371648 TNPO2O14787 897 aaKnown RBP17.39■□□□□ 0.37
EDF1-202ENST00000371648 RNF113AO15541 343 aaKnown RBP17.39■□□□□ 0.37
EDF1-202ENST00000371648 MBD4O95243 580 aa17.39■□□□□ 0.37
EDF1-202ENST00000371648 CHGBP05060 677 aa17.39■□□□□ 0.37
EDF1-202ENST00000371648 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
EDF1-202ENST00000371648 FLT3LGP49771 235 aa17.39■□□□□ 0.37
EDF1-202ENST00000371648 LCORLQ8N3X6 602 aa17.39■□□□□ 0.37
EDF1-202ENST00000371648 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
EDF1-202ENST00000371648 RNF208Q9H0X6 261 aa17.39■□□□□ 0.37
EDF1-202ENST00000371648 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
EDF1-202ENST00000371648 HERC5Q9UII4 1024 aaKnown RBP17.39■□□□□ 0.37
EDF1-202ENST00000371648 DOCK1Q14185 1865 aa17.39■□□□□ 0.37
EDF1-202ENST00000371648 COL2A1P02458 1487 aaPredicted RBP17.38■□□□□ 0.37
EDF1-202ENST00000371648 USP17L5A8MUK1 530 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
EDF1-202ENST00000371648 HMGCS2P54868 508 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 UBXN2AP68543 259 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 HABP4Q5JVS0 413 aaKnown RBP17.38■□□□□ 0.37
EDF1-202ENST00000371648 TTC6Q86TZ1 520 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 PROCA1Q8NCQ7 364 aaPredicted RBP17.38■□□□□ 0.37
EDF1-202ENST00000371648 SLAIN1Q8ND83 568 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 SHISA4Q96DD7 197 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 DDRGK1Q96HY6 314 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 PNMA3Q9UL41 463 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 MYH1P12882 1939 aa17.38■□□□□ 0.37
EDF1-202ENST00000371648 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 ADCY3O60266 1144 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 GJB1P08034 283 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 NKX2-3Q8TAU0 364 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 SDR42E1Q8WUS8 393 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 AS3MTQ9HBK9 375 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 TAOK2Q9UL54 1235 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 FOCADQ5VW36 1801 aa17.37■□□□□ 0.37
EDF1-202ENST00000371648 PHIPQ8WWQ0 1821 aa17.36■□□□□ 0.37
EDF1-202ENST00000371648 ELNP15502 786 aa17.36■□□□□ 0.37
EDF1-202ENST00000371648 GJA8P48165 433 aa17.36■□□□□ 0.37
EDF1-202ENST00000371648 JAG1P78504 1218 aa17.36■□□□□ 0.37
EDF1-202ENST00000371648 EVI5LQ96CN4 794 aa17.36■□□□□ 0.37
EDF1-202ENST00000371648 PUS7LQ9H0K6 701 aaKnown RBP17.36■□□□□ 0.37
EDF1-202ENST00000371648 UNC93B1Q9H1C4 597 aa17.36■□□□□ 0.37
EDF1-202ENST00000371648 SLC4A4Q9Y6R1 1079 aa17.36■□□□□ 0.37
EDF1-202ENST00000371648 SALL3Q9BXA9 1300 aa17.36■□□□□ 0.37
EDF1-202ENST00000371648 PRKAB2O43741 272 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 NEFLP07196 543 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 PABPC4Q13310 644 aaKnown RBP eCLIP17.35■□□□□ 0.377e-10■■■□□ 16.4
EDF1-202ENST00000371648 SHROOM1Q2M3G4 852 aaPredicted RBP17.35■□□□□ 0.37
EDF1-202ENST00000371648 AMOTL1Q8IY63 956 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 APPBP2Q92624 585 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 COA7Q96BR5 231 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
EDF1-202ENST00000371648 DNAJC18Q9H819 358 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 ATP8A2Q9NTI2 1148 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 PCDH10Q9P2E7 1040 aa17.35■□□□□ 0.37
EDF1-202ENST00000371648 H0YGN5 161 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 GDF11O95390 407 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 APPP05067 770 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 INHAP05111 366 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 CENPBP07199 599 aaPredicted RBP17.34■□□□□ 0.37
EDF1-202ENST00000371648 ASNSP08243 561 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 PTPRFP10586 1907 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 GCLCP48506 637 aaPredicted RBP17.34■□□□□ 0.37
EDF1-202ENST00000371648 MTMR2Q13614 643 aa17.34■□□□□ 0.37
EDF1-202ENST00000371648 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms