RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 DBF4Q9UBU7 674 aaPredicted RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 MAPK8IP1Q9UQF2 711 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 PBX1P40424 430 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 NAP1L1P55209 391 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 NR1I3Q14994 352 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 CCDC57Q2TAC2 916 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 GRAMD1CQ8IYS0 662 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 C8orf76Q96K31 380 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 NAT10Q9H0A0 1025 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 FOXP2O15409 715 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 ZSCAN12O43309 604 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 RASSF9O75901 435 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 PDIA3P30101 505 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 RBL2Q08999 1139 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 ZNF569Q5MCW4 686 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 RPAINQ86UA6 219 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 ARL8AQ96BM9 186 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 CAPN7Q9Y6W3 813 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 OVOS2A0A0J9YW53 1432 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 OVOS2Q6IE36 1432 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 KLF18A0A0U1RQI7 1052 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 FRMD3A2A2Y4 597 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 ELF1P32519 619 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 KCTD19Q17RG1 926 aaPredicted RBP9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 PREPLQ4J6C6 727 aaPredicted RBP9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 NOC3LQ8WTT2 800 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 NCAPD2Q15021 1401 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 GRM8O00222 908 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 FXR1P51114 621 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 MYL5Q02045 173 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 TSEN2Q8NCE0 465 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 PHKBQ93100 1093 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 FAM89AQ96GI7 184 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 C19orf44Q9H6X5 657 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 DENND2AQ9ULE3 1009 aa9.91□□□□□ -0.82
SMARCA1-203ENST00000371123 ENC1O14682 589 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 PTPAQ15257 358 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 HPS5Q9UPZ3 1129 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 MRC1P22897 1456 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 ANKRD1Q15327 319 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 WWC3Q9ULE0 1092 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 PCDHA5Q9Y5H7 936 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 ALS2Q96Q42 1657 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 MYH13Q9UKX3 1938 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 EIF3HO15372 352 aaKnown RBP eCLIP9.9□□□□□ -0.827e-7■□□□□ 9.9
SMARCA1-203ENST00000371123 TATP17735 454 aaPredicted RBP9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 METTL24Q5JXM2 366 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 SLC9C2Q5TAH2 1124 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 RASGRP2Q7LDG7 609 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 MIGA1Q8NAN2 632 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 N4BP2L2Q92802 583 aaPredicted RBP9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 TATDN2Q93075 761 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
SMARCA1-203ENST00000371123 ABCA3Q99758 1704 aa9.9□□□□□ -0.83
SMARCA1-203ENST00000371123 ZNF185O15231 689 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 COG1Q8WTW3 980 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 MAP3K14Q99558 947 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 ANKARQ7Z5J8 1434 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 KDRP35968 1356 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 OPLAHO14841 1288 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 PPP1R12AO14974 1030 aaPredicted RBP9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 MARCH6O60337 910 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 FSBPO95073 299 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 USP14P54578 494 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 DPYDQ12882 1025 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 SH2D3CQ8N5H7 860 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 BCAS4Q8TDM0 211 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 INCENPQ9NQS7 918 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 KDM3BQ7LBC6 1761 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 RGPD8O14715 1765 aaPredicted RBP9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 SPTLC2O15270 562 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 HOXC9P31274 260 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 GRIK3Q13003 919 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 ACCSLQ4AC99 568 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 SPECC1LQ69YQ0 1117 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 ARHGEF25Q86VW2 580 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 POLR3EQ9NVU0 708 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 TBC1D2BQ9UPU7 963 aa9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 PHRF1Q9P1Y6 1649 aaKnown RBP9.89□□□□□ -0.83
SMARCA1-203ENST00000371123 NUTM2BA6NNL0 878 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 NUTM2EB1AL46 878 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 PRDM1O75626 825 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 GYPCP04921 128 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 MATR3P43243 847 aaKnown RBP eCLIP9.88□□□□□ -0.832e-7■■■□□ 19.2
SMARCA1-203ENST00000371123 APBA1Q02410 837 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 MYSM1Q5VVJ2 828 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 NUTM2AQ8IVF1 878 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 CTCFLQ8NI51 663 aaPredicted RBP9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 BCCIPQ9P287 314 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 BIRC2Q13490 618 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 GRIPAP1Q4V328 841 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 EPHA10Q5JZY3 1008 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 ZNF483Q8TF39 744 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms