RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ADCY7P51828 1080 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 POLA2Q14181 598 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 CYP21A2P08686 494 aa13.27□□□□□ -0.28
DEPDC1-201ENST00000370966 GAS2L3Q86XJ1 694 aa13.27□□□□□ -0.28
DEPDC1-201ENST00000370966 CCDC51Q96ER9 411 aa13.27□□□□□ -0.28
DEPDC1-201ENST00000370966 MAPK8IP1Q9UQF2 711 aa13.27□□□□□ -0.28
DEPDC1-201ENST00000370966 FRMD4BQ9Y2L6 1034 aa13.27□□□□□ -0.28
DEPDC1-201ENST00000370966 CD2BP2O95400 341 aaKnown RBP13.27□□□□□ -0.28
DEPDC1-201ENST00000370966 REXO1Q8N1G1 1221 aaKnown RBP13.27□□□□□ -0.28
DEPDC1-201ENST00000370966 SNX29Q8TEQ0 813 aa13.27□□□□□ -0.29
DEPDC1-201ENST00000370966 ARHGEF10LQ9HCE6 1279 aa13.27□□□□□ -0.29
DEPDC1-201ENST00000370966 IL6STP40189 918 aaPredicted RBP13.27□□□□□ -0.29
DEPDC1-201ENST00000370966 RAPGEF1Q13905 1077 aa13.27□□□□□ -0.29
DEPDC1-201ENST00000370966 PLCD4Q9BRC7 762 aa13.27□□□□□ -0.29
DEPDC1-201ENST00000370966 SERTAD1Q9UHV2 236 aa13.27□□□□□ -0.29
DEPDC1-201ENST00000370966 IKBKGQ9Y6K9 419 aa13.27□□□□□ -0.29
DEPDC1-201ENST00000370966 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 SLC1A4P43007 532 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 SYNCQ9H7C4 482 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 PCDHA7Q9UN72 937 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 TMEM94Q12767 1356 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 SCRN1Q12765 414 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 DCAF17Q5H9S7 520 aaPredicted RBP13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 RTEL1Q9NZ71 1219 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 TNKSO95271 1327 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 ATP2A1O14983 1001 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 UBE4AQ14139 1066 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 CARD6Q9BX69 1037 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 MED23Q9ULK4 1368 aa13.26□□□□□ -0.29
DEPDC1-201ENST00000370966 TRERF1Q96PN7 1200 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 NSRP1Q9H0G5 558 aaKnown RBP13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 SLC9C1Q4G0N8 1177 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 CABP7Q86V35 215 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 MAPKAPK5Q8IW41 473 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 C17orf53Q8N3J3 647 aaPredicted RBP13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 HERC4Q5GLZ8 1057 aaPredicted RBP13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 CFAP58Q5T655 872 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 GALNT17Q6IS24 598 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 ATRIPQ8WXE1 791 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 GREM2Q9H772 168 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 TLR7Q9NYK1 1049 aaKnown RBP13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 MTUS1Q9ULD2 1270 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 UNC13BO14795 1591 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 CALCRLQ16602 461 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 DPP8Q6V1X1 898 aaPredicted RBP13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 NAP1L3Q99457 506 aaPredicted RBP13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 NUCKS1Q9H1E3 243 aaKnown RBP13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 TAB2Q9NYJ8 693 aa13.25□□□□□ -0.29
DEPDC1-201ENST00000370966 MTX1Q13505 466 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 PNOCQ13519 176 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 FAM98CQ17RN3 349 aaKnown RBP13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 FCHSD1Q86WN1 690 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 TGFBRAP1Q8WUH2 860 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 NELFBQ8WX92 580 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 GIMAP7Q8NHV1 300 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 JAKMIP2Q96AA8 810 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 NT5C3AQ9H0P0 336 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 WDR17Q8IZU2 1322 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 BTBD18B2RXH4 712 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 EBAG9O00559 213 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 PHKA1P46020 1223 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 BCAMP50895 628 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 BLIDQ8IZY5 108 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 PUS3Q9BZE2 481 aaKnown RBP13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 VPS18Q9P253 973 aa13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
DEPDC1-201ENST00000370966 CALUO43852 315 aaPredicted RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 DDAH1O94760 285 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 IBSPP21815 317 aaPredicted RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 MAGEA1P43355 309 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 EIF6P56537 245 aaKnown RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 SLC39A14Q15043 492 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 FAM47AQ5JRC9 791 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 DNM3Q9UQ16 869 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 ATP6V0A2Q9Y487 856 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 CEP83Q9Y592 693 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 hCG_1642624A0A1W2PR95 340 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 SEMA3EO15041 775 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 GYG1P46976 350 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 MCTP2Q6DN12 878 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 DKC1O60832 514 aaKnown RBP eCLIP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 PNMA1Q8ND90 353 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 PI4K2BQ8TCG2 481 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 SECISBP2LQ93073 1101 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms