RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 NBPF3Q9H094 633 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 ADD3Q9UEY8 706 aaKnown RBP10.95□□□□□ -0.66
LRRC40-201ENST00000370952 FBXO2Q9UK22 296 aaPredicted RBP10.95□□□□□ -0.66
LRRC40-201ENST00000370952 HPCAL4Q9UM19 191 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 TTF2Q9UNY4 1162 aaKnown RBP10.95□□□□□ -0.66
LRRC40-201ENST00000370952 SYNRGQ9UMZ2 1314 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 EXOC5O00471 708 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 GPAA1O43292 621 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 GUCY1A2P33402 732 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 GGCXP38435 758 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 PBX1P40424 430 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 NT5DC1Q5TFE4 455 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 CPLX2Q6PUV4 134 aaKnown RBP10.95□□□□□ -0.66
LRRC40-201ENST00000370952 MMS22LQ6ZRQ5 1243 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 PCDHB6Q9Y5E3 794 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 SIPA1L3O60292 1781 aaPredicted RBP10.95□□□□□ -0.66
LRRC40-201ENST00000370952 A0A087WUV0 522 aaPredicted RBP10.95□□□□□ -0.66
LRRC40-201ENST00000370952 GOLGA8AA7E2F4 631 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 CEBPAP49715 358 aaPredicted RBP10.95□□□□□ -0.66
LRRC40-201ENST00000370952 AMPD2Q01433 879 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 LRP10Q7Z4F1 713 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 STAMQ92783 540 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
LRRC40-201ENST00000370952 MMS19Q96T76 1030 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 KAT14Q9H8E8 782 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 WWC3Q9ULE0 1092 aa10.95□□□□□ -0.66
LRRC40-201ENST00000370952 CDHR2Q9BYE9 1310 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 ZC3H4Q9UPT8 1303 aaKnown RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 SH2B2O14492 632 aaPredicted RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 ZBTB43O43298 467 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 ACTN4O43707 911 aaKnown RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 CDKL5O76039 1030 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 MYBL2P10244 700 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 PTPREP23469 700 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 IL15P40933 162 aaPredicted RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 ZAP70P43403 619 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 NR5A1Q13285 461 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 TUBB2AQ13885 445 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 NTRK3Q16288 839 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 FBXW10Q5XX13 1052 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 TTC19Q6DKK2 380 aaPredicted RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 WDR93Q6P2C0 686 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 NOSTRINQ8IVI9 506 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 DIS3L2Q8IYB7 885 aaKnown RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 CMTR1Q8N1G2 835 aaKnown RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 CHP1Q99653 195 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 TUBB2BQ9BVA1 445 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 VPS16Q9H269 839 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 PHF8Q9UPP1 1060 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 EID1Q9Y6B2 187 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 DDX60Q8IY21 1712 aaKnown RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 EYA2O00167 538 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 ERLIN2O94905 339 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 APPP05067 770 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 KCNA6P17658 529 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 USP14P54578 494 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 STIM1Q13586 685 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 SPATA1Q5VX52 437 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 MCTP2Q6DN12 878 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 CNGA4Q8IV77 575 aa10.94□□□□□ -0.66
LRRC40-201ENST00000370952 NUP88Q99567 741 aaPredicted RBP10.94□□□□□ -0.66
LRRC40-201ENST00000370952 NFAT5O94916 1531 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 CPP00450 1065 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 ERCC5P28715 1186 aaPredicted RBP10.93□□□□□ -0.66
LRRC40-201ENST00000370952 AARSP49588 968 aaKnown RBP eCLIP10.93□□□□□ -0.66
LRRC40-201ENST00000370952 FILIP1LQ4L180 1135 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 CSRNP2Q9H175 543 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 FAM217BQ9NTX9 383 aaPredicted RBP10.93□□□□□ -0.66
LRRC40-201ENST00000370952 ABHD10Q9NUJ1 306 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 A0A087X0B3 334 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 ATP1A1P05023 1023 aaKnown RBP10.93□□□□□ -0.66
LRRC40-201ENST00000370952 EIF5P55010 431 aaKnown RBP10.93□□□□□ -0.66
LRRC40-201ENST00000370952 DPYDQ12882 1025 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 AEBP2Q6ZN18 517 aaPredicted RBP10.93□□□□□ -0.66
LRRC40-201ENST00000370952 TRIML1Q8N9V2 468 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 CTCFLQ8NI51 663 aaPredicted RBP10.93□□□□□ -0.66
LRRC40-201ENST00000370952 APPBP2Q92624 585 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 FAM169AQ9Y6X4 670 aa10.93□□□□□ -0.66
LRRC40-201ENST00000370952 ARFGEF2Q9Y6D5 1785 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 N4BP3O15049 544 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 TUBB4BP68371 445 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 CUL4BQ13620 913 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 TMTC1Q8IUR5 882 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 SUGP1Q8IWZ8 645 aaKnown RBP10.92□□□□□ -0.66
LRRC40-201ENST00000370952 COG1Q8WTW3 980 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 EPSTI1Q96J88 318 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 CRACR2AQ9BSW2 395 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 GPR108Q9NPR9 543 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 TAB2Q9NYJ8 693 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 CTNND2Q9UQB3 1225 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 OVOS2A0A0G2JMS6 1433 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 AGPSO00116 658 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 KRT9P35527 623 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 MNAT1P51948 309 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 SSRP1Q08945 709 aaKnown RBP10.92□□□□□ -0.66
LRRC40-201ENST00000370952 CDKAL1Q5VV42 579 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 XAGE2Q96GT9 111 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 VIPAS39Q9H9C1 493 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 SLC52A2Q9HAB3 445 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms