RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
VANGL1-204ENST00000369510 AHI1Q8N157 1196 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 ZNF653Q96CK0 615 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 CCPG1Q9ULG6 757 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 PRG4Q92954 1404 aaPredicted RBP9.59□□□□□ -0.87
VANGL1-204ENST00000369510 PSMA7O14818 248 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 SLC9A1P19634 815 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 DEFA1P59665 94 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 DEFA3P59666 94 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 PSMA8Q8TAA3 256 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 UBXN8O00124 270 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 GNAI2P04899 355 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 TMEM132EQ6IEE7 984 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 NR1H4Q96RI1 486 aaPredicted RBP9.59□□□□□ -0.87
VANGL1-204ENST00000369510 FOXP3Q9BZS1 431 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 NDEL1Q9GZM8 345 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 KCNG1Q9UIX4 513 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 ZBTB12Q9Y330 459 aaPredicted RBP9.59□□□□□ -0.87
VANGL1-204ENST00000369510 WDR97A6NE52 1622 aa9.59□□□□□ -0.87
VANGL1-204ENST00000369510 CAPRIN1Q14444 709 aaKnown RBP9.59□□□□□ -0.88
VANGL1-204ENST00000369510 SNCBQ16143 134 aa9.59□□□□□ -0.88
VANGL1-204ENST00000369510 AQRO60306 1485 aaKnown RBP eCLIP9.58□□□□□ -0.886e-6■■■■□ 25.1
VANGL1-204ENST00000369510 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 DNA2P51530 1060 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 ZC3H12BQ5HYM0 836 aaKnown RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 RPGRQ92834 1020 aaKnown RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 TNPO1Q92973 898 aaKnown RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 TUFT1Q9NNX1 390 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 EIF3CLB5ME19 914 aaKnown RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 RAB44Q7Z6P3 723 aaPredicted RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 EIF3CQ99613 913 aaKnown RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 RAB17Q9H0T7 212 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 SLC52A1Q9NWF4 448 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 ZNF652Q9Y2D9 606 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 SERPINB6P35237 376 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 PDZD4Q76G19 769 aaPredicted RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 KDM1AO60341 852 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 RASSF9O75901 435 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 LCA5LO95447 670 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 RPL13P26373 211 aaKnown RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 UBA7P41226 1012 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 TRPC1P48995 793 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 MMEL1Q495T6 779 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 MPRIPQ6WCQ1 1025 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 OLFM3Q96PB7 478 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 SUCLA2Q9P2R7 463 aaPredicted RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 GOLGA8JA6NMD2 632 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 RBM5P52756 815 aaKnown RBP eCLIP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 RASA3Q14644 834 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 RUNDC3BQ96NL0 473 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 OLFML3Q9NRN5 406 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 CASKIN1Q8WXD9 1431 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 PPIDQ08752 370 aaKnown RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 CATIPQ7Z7H3 387 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 C8orf76Q96K31 380 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 UPF3AQ9H1J1 476 aaKnown RBP9.58□□□□□ -0.88
VANGL1-204ENST00000369510 MYLK2Q9H1R3 596 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 CHMP2BQ9UQN3 213 aa9.58□□□□□ -0.88
VANGL1-204ENST00000369510 HFM1A2PYH4 1435 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 MTHFSP49914 203 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 TMTC4Q5T4D3 741 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 TADA1Q96BN2 335 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 RBSNQ9H1K0 784 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 N4BP3O15049 544 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 MAP3K7O43318 606 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 KRT74Q7RTS7 529 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 CCHCR1Q8TD31 782 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 ABTB1Q969K4 478 aaPredicted RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 CNBD2Q96M20 576 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 MCF2LO15068 1137 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 SART1O43290 800 aaKnown RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 PNMA8AQ86V59 439 aaPredicted RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 EFHD2Q96C19 240 aaPredicted RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 NBPF6Q5VWK0 638 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 LRRC8EQ6NSJ5 796 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 TMC6Q7Z403 805 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 DENND6AQ8IWF6 608 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 NBPF4Q96M43 638 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 CARD9Q9H257 536 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 FRMD4BQ9Y2L6 1034 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 EFCAB5A4FU69 1503 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 LRRC49Q8IUZ0 686 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 SEPT3Q9UH03 358 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 A0A1B0GVL5 298 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 RTL3Q8N8U3 475 aaKnown RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 LEO1Q8WVC0 666 aaPredicted RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 SUPT6HQ7KZ85 1726 aaKnown RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 SESN2P58004 480 aaPredicted RBP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.57□□□□□ -0.88
VANGL1-204ENST00000369510 CCDC42Q96M95 316 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 CSRNP1Q96S65 589 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 TINF2Q9BSI4 451 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 LRRC9Q6ZRR7 1453 aa9.57□□□□□ -0.88
VANGL1-204ENST00000369510 GOLGA8MH3BSY2 632 aa9.56□□□□□ -0.88
VANGL1-204ENST00000369510 STK3Q13188 491 aa9.56□□□□□ -0.88
VANGL1-204ENST00000369510 ISM2Q6H9L7 571 aa9.56□□□□□ -0.88
VANGL1-204ENST00000369510 NHEJ1Q9H9Q4 299 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms