RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 HERC4Q5GLZ8 1057 aaPredicted RBP17.47■□□□□ 0.39
PRDM1-203ENST00000369096 SYNRGQ9UMZ2 1314 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 SMC5Q8IY18 1101 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 PPME1Q9Y570 386 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 CPA1P15085 419 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 RPS6KA1Q15418 735 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 WHAMMP3Q1A5X7 153 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 DZIP3Q86Y13 1208 aaKnown RBP17.47■□□□□ 0.39
PRDM1-203ENST00000369096 LRRC43Q8N309 656 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 ARHGAP42A6NI28 874 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 KLHL30Q0D2K2 578 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 TFCP2Q12800 502 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 PAK1Q13153 545 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
PRDM1-203ENST00000369096 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.47■□□□□ 0.39
PRDM1-203ENST00000369096 NUP58Q9BVL2 599 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 IRS4O14654 1257 aaPredicted RBP17.46■□□□□ 0.39
PRDM1-203ENST00000369096 STX2P32856 288 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 ANO1Q5XXA6 986 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 PEX26Q7Z412 305 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 TMTC1Q8IUR5 882 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 NCAPGQ9BPX3 1015 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 RBSNQ9H1K0 784 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
PRDM1-203ENST00000369096 POLR2DO15514 142 aaKnown RBP17.46■□□□□ 0.39
PRDM1-203ENST00000369096 NYXQ9GZU5 481 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 ARHGEF5Q12774 1597 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 EXOC3O60645 756 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 FLOT1O75955 427 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 RASSF2P50749 326 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 CFAP221Q4G0U5 840 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 PHLDB3Q6NSJ2 640 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 TAB2Q9NYJ8 693 aa17.46■□□□□ 0.39
PRDM1-203ENST00000369096 SMAP1Q8IYB5 467 aaPredicted RBP17.46■□□□□ 0.38
PRDM1-203ENST00000369096 TEX11Q8IYF3 940 aa17.46■□□□□ 0.38
PRDM1-203ENST00000369096 C8orf58Q8NAV2 365 aa17.46■□□□□ 0.38
PRDM1-203ENST00000369096 GDAP1L1Q96MZ0 367 aa17.46■□□□□ 0.38
PRDM1-203ENST00000369096 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.38
PRDM1-203ENST00000369096 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
PRDM1-203ENST00000369096 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 SAP30BPQ9UHR5 308 aaKnown RBP17.45■□□□□ 0.38
PRDM1-203ENST00000369096 B4E1Z4 1266 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 NOP56O00567 594 aaKnown RBP17.45■□□□□ 0.38
PRDM1-203ENST00000369096 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
PRDM1-203ENST00000369096 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
PRDM1-203ENST00000369096 PPFIA4O75335 1185 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 DEXIO95424 95 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 KRT19P08727 400 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 TROVE2P10155 538 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRDM1-203ENST00000369096 PLEKHA4Q9H4M7 779 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
PRDM1-203ENST00000369096 ACEP12821 1306 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 IFNB1P01574 187 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 RFX1P22670 979 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 MUM1Q2TAK8 710 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 DENND2CQ68D51 928 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 NCAPH2Q6IBW4 605 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 EYA3Q99504 573 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 MYO1AQ9UBC5 1043 aa17.45■□□□□ 0.38
PRDM1-203ENST00000369096 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
PRDM1-203ENST00000369096 ADGRF5Q8IZF2 1346 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 MAP3K21Q5TCX8 1036 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 SLF1Q9BQI6 1058 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 SPECC1L-ADORA2AF8WAN1 911 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 NFE2L3Q9Y4A8 694 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 CROCC2H7BZ55 1655 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 MYCLP12524 364 aaPredicted RBP17.44■□□□□ 0.38
PRDM1-203ENST00000369096 OAS2P29728 719 aaKnown RBP17.44■□□□□ 0.38
PRDM1-203ENST00000369096 COG7P83436 770 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 RNF168Q8IYW5 571 aaPredicted RBP17.44■□□□□ 0.38
PRDM1-203ENST00000369096 MLKLQ8NB16 471 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 SNX29Q8TEQ0 813 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 PLCB1Q9NQ66 1216 aa17.44■□□□□ 0.38
PRDM1-203ENST00000369096 ARHGAP6O43182 974 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 CHMLP26374 656 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 CNGA1P29973 690 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 DYMQ7RTS9 669 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 DIS3L2Q8IYB7 885 aaKnown RBP17.43■□□□□ 0.38
PRDM1-203ENST00000369096 SYCE1Q8N0S2 351 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 TBC1D7Q9P0N9 293 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 LRWD1Q9UFC0 647 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 RAD50Q92878 1312 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 RGS16O15492 202 aaPredicted RBP17.43■□□□□ 0.38
PRDM1-203ENST00000369096 RIOK1Q9BRS2 568 aaKnown RBP17.43■□□□□ 0.38
PRDM1-203ENST00000369096 POLKQ9UBT6 870 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 CDC42BPAQ5VT25 1732 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 DDX39AO00148 427 aaKnown RBP17.43■□□□□ 0.38
PRDM1-203ENST00000369096 DKC1O60832 514 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRDM1-203ENST00000369096 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 MRPL50Q8N5N7 158 aaKnown RBP17.43■□□□□ 0.38
PRDM1-203ENST00000369096 ANKRD2Q9GZV1 360 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 NSD2O96028 1365 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 FAM173BQ6P4H8 233 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 NELFCDQ8IXH7 590 aa17.43■□□□□ 0.38
PRDM1-203ENST00000369096 C17orf53Q8N3J3 647 aaPredicted RBP17.42■□□□□ 0.38
PRDM1-203ENST00000369096 HVCN1Q96D96 273 aa17.42■□□□□ 0.38
PRDM1-203ENST00000369096 XAB2Q9HCS7 855 aaKnown RBP17.42■□□□□ 0.38
PRDM1-203ENST00000369096 OPHN1O60890 802 aa17.42■□□□□ 0.38
PRDM1-203ENST00000369096 HIP1RO75146 1068 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms