RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 U2AF2P26368 475 aaKnown RBP eCLIP9.59□□□□□ -0.879e-7■■□□□ 13.8
PTPRK-206ENST00000368215 ADKP55263 362 aaKnown RBP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 MLKLQ8NB16 471 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 GPKOWQ92917 476 aaPredicted RBP eCLIP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 PARP1P09874 1014 aaKnown RBP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 SPAG1Q07617 926 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 GPIHBP1Q8IV16 184 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 MB21D2Q8IYB1 491 aaPredicted RBP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 MRFAP1L1Q96HT8 127 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 GOLGA8HP0CJ92 632 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 ERCC3P19447 782 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.58□□□□□ -0.88
PTPRK-206ENST00000368215 MEGF6O75095 1541 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 UBE4AQ14139 1066 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 WDR66Q8TBY9 1149 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 DRC1Q96MC2 740 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 PUF60Q9UHX1 559 aaKnown RBP9.58□□□□□ -0.88
PTPRK-206ENST00000368215 RIPOR2Q9Y4F9 1068 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 SYNRGQ9UMZ2 1314 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 TERF1P54274 439 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 EXOSC10Q01780 885 aaKnown RBP9.58□□□□□ -0.88
PTPRK-206ENST00000368215 CT47A1Q5JQC4 288 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-206ENST00000368215 TCERG1LQ5VWI1 586 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 SMARCC2Q8TAQ2 1214 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 LUC7LQ9NQ29 371 aaKnown RBP9.58□□□□□ -0.88
PTPRK-206ENST00000368215 AKR1B15C9JRZ8 316 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-206ENST00000368215 CDC27P30260 824 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 ELF2Q15723 593 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 ZNF569Q5MCW4 686 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 CCDC94Q9BW85 323 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-206ENST00000368215 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
PTPRK-206ENST00000368215 KCNQ2O43526 872 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 ARID4AP29374 1257 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 WWC2Q6AWC2 1192 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 TAB2Q9NYJ8 693 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 IMPACTQ9P2X3 320 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 GUCA1BQ9UMX6 200 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 KDM6AO15550 1401 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 CCNT1O60563 726 aaKnown RBP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 FMNL1O95466 1100 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 PLCG2P16885 1265 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 GNA11P29992 359 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 MATR3P43243 847 aaKnown RBP eCLIP9.57□□□□□ -0.882e-6■■■□□ 19
PTPRK-206ENST00000368215 EEF2KMTQ96G04 330 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 ZMYND15Q9H091 742 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 CSRNP2Q9H175 543 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 MMRN2Q9H8L6 949 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 USP21Q9UK80 565 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 SOS2Q07890 1332 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 AKR1B10O60218 316 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 TXKP42681 527 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 TRIM28Q13263 835 aaKnown RBP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 LONRF3Q496Y0 759 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 PNMA1Q8ND90 353 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 RASGRP4Q8TDF6 673 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 PCDHB6Q9Y5E3 794 aa9.57□□□□□ -0.88
PTPRK-206ENST00000368215 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-206ENST00000368215 EIF3JO75822 258 aaKnown RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 ATP1A3P13637 1013 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 IFNAR1P17181 557 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 PTGDRQ13258 359 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 PPP2R5BQ15173 497 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 JADE2Q9NQC1 790 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 RIMS1Q86UR5 1692 aaKnown RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 ZNF804BA4D1E1 1349 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 MYO1BO43795 1136 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 SMYD4Q8IYR2 804 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 GPR101Q96P66 508 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 DESI2Q9BSY9 194 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 CARD6Q9BX69 1037 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 ALDH8A1Q9H2A2 487 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 PALLDQ8WX93 1383 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 KIF28PB7ZC32 967 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 FGFR1OPO95684 399 aaKnown RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 CDC25AP30304 524 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 BMS1Q14692 1282 aaKnown RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 CCDC66A2RUB6 948 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 USO1O60763 962 aaKnown RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 MMP1P03956 469 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 COL9A3Q14050 684 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 INF2Q27J81 1249 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 MFSD14BQ5SR56 506 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 KRT79Q5XKE5 535 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 FAM114A1Q8IWE2 563 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 FERMT2Q96AC1 680 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 ARPP21Q9UBL0 812 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-206ENST00000368215 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
PTPRK-206ENST00000368215 RFX7Q2KHR2 1363 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 CTDNEP1O95476 244 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 SCG2P13521 617 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 LIFRP42702 1097 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 GTF2IP78347 998 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 PDE4DQ08499 809 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 ZFYVE27Q5T4F4 411 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 KRT222Q8N1A0 295 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms