RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 RILPL1Q5EBL4 403 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 COL15A1P39059 1388 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 GDF11O95390 407 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-205ENST00000368213 DNM3Q9UQ16 869 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 CARMIL3Q8ND23 1372 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 EPB41P11171 864 aaKnown RBP12.09□□□□□ -0.47
PTPRK-205ENST00000368213 CALCRLQ16602 461 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 SMC5Q8IY18 1101 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 OTUD6BQ8N6M0 293 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 TBC1D32Q96NH3 1257 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 GPR101Q96P66 508 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-205ENST00000368213 KDM2BQ8NHM5 1336 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 ZNF165P49910 485 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 ARID5AQ03989 594 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 SNX29Q8TEQ0 813 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-205ENST00000368213 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 KRT5P13647 590 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 CPA1P15085 419 aa12.09□□□□□ -0.47
PTPRK-205ENST00000368213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPRK-205ENST00000368213 CIAO1O76071 339 aa12.08□□□□□ -0.47
PTPRK-205ENST00000368213 F13A1P00488 732 aa12.08□□□□□ -0.47
PTPRK-205ENST00000368213 PSTPIP2Q9H939 334 aa12.08□□□□□ -0.47
PTPRK-205ENST00000368213 SMCO2A6NFE2 343 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 CASQ1P31415 396 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 EDC3Q96F86 508 aaKnown RBP12.08□□□□□ -0.48
PTPRK-205ENST00000368213 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 LRWD1Q9UFC0 647 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 SPATA31E1Q6ZUB1 1445 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 AOC3Q16853 763 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 hCG_1642624A0A1W2PR95 340 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 RSPH3Q86UC2 560 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 PROCA1Q8NCQ7 364 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-205ENST00000368213 ZHX1Q9UKY1 873 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-205ENST00000368213 IGBP1P78318 339 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 TTC38Q5R3I4 469 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 CCDC91Q7Z6B0 441 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 DEPTORQ8TB45 409 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 TSNARE1Q96NA8 513 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 DSCC1Q9BVC3 393 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 DHX36Q9H2U1 1008 aaKnown RBP12.08□□□□□ -0.48
PTPRK-205ENST00000368213 ADD3Q9UEY8 706 aaKnown RBP12.08□□□□□ -0.48
PTPRK-205ENST00000368213 MYO3BQ8WXR4 1341 aa12.08□□□□□ -0.48
PTPRK-205ENST00000368213 STX10O60499 249 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 ADORA1P30542 326 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 MCTP2Q6DN12 878 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 TPH2Q8IWU9 490 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 NCOA5Q9HCD5 579 aaKnown RBP12.07□□□□□ -0.48
PTPRK-205ENST00000368213 KRT19P08727 400 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 DIS3L2Q8IYB7 885 aaKnown RBP12.07□□□□□ -0.48
PTPRK-205ENST00000368213 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 TET3O43151 1660 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 PTPRMP28827 1452 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 ECE2O60344 883 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 TMOD1P28289 359 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
PTPRK-205ENST00000368213 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
PTPRK-205ENST00000368213 TBC1D9BQ66K14 1250 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 GPBP1L1Q9HC44 474 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-205ENST00000368213 KCNG1Q9UIX4 513 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 TRAF5O00463 557 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 MYCT1Q8N699 235 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 BSDC1Q9NW68 430 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-205ENST00000368213 ADCY10Q96PN6 1610 aa12.07□□□□□ -0.48
PTPRK-205ENST00000368213 GOLGA8HP0CJ92 632 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 FAM160B1Q5W0V3 765 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 ZBTB8OSQ8IWT0 167 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 TMEM110-MUSTN1A8MSY1 372 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 ABI1Q8IZP0 508 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 NEK11Q8NG66 645 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 PHKBQ93100 1093 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 KRT26Q7Z3Y9 468 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 CALUO43852 315 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-205ENST00000368213 TMX1Q9H3N1 280 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 SUGCTQ9HAC7 445 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 PI4KBQ9UBF8 816 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 UBASH3AP57075 661 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 POLA2Q14181 598 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 PALD1Q9ULE6 856 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 LRFN2Q9ULH4 789 aa12.06□□□□□ -0.48
PTPRK-205ENST00000368213 STX17P56962 302 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-205ENST00000368213 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 EIF3JO75822 258 aaKnown RBP12.05□□□□□ -0.48
PTPRK-205ENST00000368213 CAVIN2O95810 425 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 GSDMDP57764 484 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 IFFO1Q0D2I5 559 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 RAPGEF1Q13905 1077 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 PRR16Q569H4 304 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 FAM200AQ8TCP9 573 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-205ENST00000368213 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms