RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 FSTL1Q12841 308 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 DLK2Q6UY11 383 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 CLEC17AQ6ZS10 378 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 ZNF287Q9HBT7 754 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 HDAC9Q9UKV0 1011 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 ECM29Q5VYK3 1845 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 KLF18A0A0U1RQI7 1052 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 ERICH2A1L162 156 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 DHX16O60231 1041 aaKnown RBP14.13□□□□□ -0.15
USF1-203ENST00000368021 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
USF1-203ENST00000368021 WDHD1O75717 1129 aaPredicted RBP14.13□□□□□ -0.15
USF1-203ENST00000368021 BRD1O95696 1058 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 POLR3DP05423 398 aaPredicted RBP14.13□□□□□ -0.15
USF1-203ENST00000368021 CYP2D6P10635 497 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 GJB2P29033 226 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 RCAN1P53805 252 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 NFKBIBQ15653 356 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 CDC42EP5Q6NZY7 148 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 IQCA1Q86XH1 822 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 TNPO1Q92973 898 aaKnown RBP14.13□□□□□ -0.15
USF1-203ENST00000368021 UBAC1Q9BSL1 405 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 USP40Q9NVE5 1235 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 ADAMTSL1Q8N6G6 1762 aa14.12□□□□□ -0.15
USF1-203ENST00000368021 TRAF5O00463 557 aa14.12□□□□□ -0.15
USF1-203ENST00000368021 PDCP20941 246 aa14.12□□□□□ -0.15
USF1-203ENST00000368021 HTRA3P83110 453 aa14.12□□□□□ -0.15
USF1-203ENST00000368021 PKP1Q13835 747 aa14.12□□□□□ -0.15
USF1-203ENST00000368021 APOA5Q6Q788 366 aa14.12□□□□□ -0.15
USF1-203ENST00000368021 GLIS2Q9BZE0 524 aaPredicted RBP14.12□□□□□ -0.15
USF1-203ENST00000368021 HPS5Q9UPZ3 1129 aa14.12□□□□□ -0.15
USF1-203ENST00000368021 GOLGA8BA8MQT2 603 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 WNT10BO00744 389 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 RANBP6O60518 1105 aaKnown RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 ITGBL1O95965 494 aaPredicted RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 MMP14P50281 582 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 PLCD1P51178 756 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 HMGN5P82970 282 aaKnown RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 EVX2Q03828 476 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 WTAPQ15007 396 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 ANGEL2Q5VTE6 544 aaKnown RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 SMARCC2Q8TAQ2 1214 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 IDI2Q9BXS1 227 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 GGA3Q9NZ52 723 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 ZDHHC9Q9Y397 364 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 WDR33Q9C0J8 1336 aaKnown RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 NID2Q14112 1375 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 PRDM1O75626 825 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 DLGAP5Q15398 846 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 SEC23AQ15436 765 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 C16orf86Q6ZW13 317 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 TTC6Q86TZ1 520 aa14.11□□□□□ -0.15
USF1-203ENST00000368021 NSUN7Q8NE18 718 aaKnown RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 DCPSQ96C86 337 aaKnown RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 ZSCAN10Q96SZ4 725 aaPredicted RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 NAP1L2Q9ULW6 460 aaPredicted RBP14.11□□□□□ -0.15
USF1-203ENST00000368021 CCDC69A6NI79 296 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 STX6O43752 255 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 SYT1P21579 422 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 CCT2P78371 535 aaKnown RBP14.1□□□□□ -0.15
USF1-203ENST00000368021 CFAP100Q494V2 611 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 USP48Q86UV5 1035 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 ZC3H15Q8WU90 426 aaKnown RBP14.1□□□□□ -0.15
USF1-203ENST00000368021 GBP4Q96PP9 640 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 OSBPL5Q9H0X9 879 aaPredicted RBP14.1□□□□□ -0.15
USF1-203ENST00000368021 DDX4Q9NQI0 724 aaKnown RBP14.1□□□□□ -0.15
USF1-203ENST00000368021 SAP30BPQ9UHR5 308 aaKnown RBP14.1□□□□□ -0.15
USF1-203ENST00000368021 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 KIF3AQ9Y496 699 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 SLC12A7Q9Y666 1083 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 TNKSO95271 1327 aa14.1□□□□□ -0.15
USF1-203ENST00000368021 ZBTB43O43298 467 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 CTDNEP1O95476 244 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 HSPA6P17066 643 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 METAP2P50579 478 aaKnown RBP eCLIP14.09□□□□□ -0.15
USF1-203ENST00000368021 CCDC178Q5BJE1 867 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 SYNE3Q6ZMZ3 975 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 ENAHQ8N8S7 591 aaPredicted RBP14.09□□□□□ -0.15
USF1-203ENST00000368021 DYNLL2Q96FJ2 89 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 PRMT6Q96LA8 375 aaPredicted RBP14.09□□□□□ -0.15
USF1-203ENST00000368021 ZKSCAN3Q9BRR0 538 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 MKNK2Q9HBH9 465 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 PGAP2Q9UHJ9 254 aa14.09□□□□□ -0.15
USF1-203ENST00000368021 TSPY2A6NKD2 308 aa14.08□□□□□ -0.15
USF1-203ENST00000368021 ADM5C9JUS6 153 aa14.08□□□□□ -0.15
USF1-203ENST00000368021 PICALMQ13492 652 aa14.08□□□□□ -0.15
USF1-203ENST00000368021 CDC37L1Q7L3B6 337 aa14.08□□□□□ -0.15
USF1-203ENST00000368021 MTMR14Q8NCE2 650 aa14.08□□□□□ -0.15
USF1-203ENST00000368021 DHX36Q9H2U1 1008 aaKnown RBP14.08□□□□□ -0.15
USF1-203ENST00000368021 ZNF408Q9H9D4 720 aa14.08□□□□□ -0.15
USF1-203ENST00000368021 NCOA5Q9HCD5 579 aaKnown RBP14.08□□□□□ -0.15
USF1-203ENST00000368021 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.15
USF1-203ENST00000368021 ISY1Q9ULR0 285 aaKnown RBP14.08□□□□□ -0.15
USF1-203ENST00000368021 CLRN2A0PK11 232 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 PTPDC1A2A3K4 754 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 JAK2O60674 1132 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms