RNA–Protein interactions for RNA: ENST00000366871.7

T-202, Transcript of Brachyury protein, humanhuman

TSL 1 (best) BASIC

Gene T, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-202ENST00000366871 UBE2Q2LH0YL09 131 aa23.59■■□□□ 1.37
T-202ENST00000366871 DDAH1O94760 285 aa23.59■■□□□ 1.37
T-202ENST00000366871 CCDC94Q9BW85 323 aaPredicted RBP23.59■■□□□ 1.37
T-202ENST00000366871 ANKRD2Q9GZV1 360 aa23.59■■□□□ 1.37
T-202ENST00000366871 PCDHA5Q9Y5H7 936 aa23.59■■□□□ 1.37
T-202ENST00000366871 COL1A1P02452 1464 aaPredicted RBP23.59■■□□□ 1.37
T-202ENST00000366871 DUOX1Q9NRD9 1551 aa23.59■■□□□ 1.37
T-202ENST00000366871 TMC6Q7Z403 805 aa23.59■■□□□ 1.37
T-202ENST00000366871 ENAHQ8N8S7 591 aaPredicted RBP23.59■■□□□ 1.37
T-202ENST00000366871 MLKLQ8NB16 471 aa23.59■■□□□ 1.37
T-202ENST00000366871 CCP110O43303 1012 aa23.58■■□□□ 1.37
T-202ENST00000366871 ORC4O43929 436 aa23.58■■□□□ 1.37
T-202ENST00000366871 SARSP49591 514 aaKnown RBP23.58■■□□□ 1.37
T-202ENST00000366871 SCN7AQ01118 1682 aa23.58■■□□□ 1.37
T-202ENST00000366871 FUT2Q10981 343 aa23.58■■□□□ 1.36
T-202ENST00000366871 IFIT1BQ5T764 474 aaKnown RBP23.58■■□□□ 1.36
T-202ENST00000366871 FOXP4Q8IVH2 680 aaPredicted RBP23.58■■□□□ 1.36
T-202ENST00000366871 LINC00116Q8NCU8 138 aa23.58■■□□□ 1.36
T-202ENST00000366871 LMOD1P29536 600 aaPredicted RBP23.57■■□□□ 1.36
T-202ENST00000366871 POSTNQ15063 836 aa23.57■■□□□ 1.36
T-202ENST00000366871 PHF20Q9BVI0 1012 aa23.57■■□□□ 1.36
T-202ENST00000366871 UBASH3AP57075 661 aa23.57■■□□□ 1.36
T-202ENST00000366871 RPS8P62241 208 aaKnown RBP23.57■■□□□ 1.36
T-202ENST00000366871 ARMCX5Q6P1M9 558 aa23.57■■□□□ 1.36
T-202ENST00000366871 ATP8A2Q9NTI2 1148 aa23.57■■□□□ 1.36
T-202ENST00000366871 IQSEC3Q9UPP2 1182 aaPredicted RBP23.57■■□□□ 1.36
T-202ENST00000366871 COL4A1P02462 1669 aa23.56■■□□□ 1.36
T-202ENST00000366871 GTF2E1P29083 439 aaPredicted RBP23.56■■□□□ 1.36
T-202ENST00000366871 NSUN4Q96CB9 384 aaKnown RBP23.56■■□□□ 1.36
T-202ENST00000366871 NLRP3Q96P20 1036 aa23.56■■□□□ 1.36
T-202ENST00000366871 BCL11BQ9C0K0 894 aaPredicted RBP23.56■■□□□ 1.36
T-202ENST00000366871 AATFQ9NY61 560 aaKnown RBP eCLIP23.56■■□□□ 1.36
T-202ENST00000366871 NARFQ9UHQ1 456 aa23.56■■□□□ 1.36
T-202ENST00000366871 KCNQ2O43526 872 aa23.56■■□□□ 1.36
T-202ENST00000366871 KRT2P35908 639 aa23.56■■□□□ 1.36
T-202ENST00000366871 TROAPQ12815 778 aa23.56■■□□□ 1.36
T-202ENST00000366871 PKN1Q16512 942 aa23.56■■□□□ 1.36
T-202ENST00000366871 CTR9Q6PD62 1173 aa23.56■■□□□ 1.36
T-202ENST00000366871 C3orf67Q6ZVT6 689 aa23.56■■□□□ 1.36
T-202ENST00000366871 KIF18AQ8NI77 898 aa23.56■■□□□ 1.36
T-202ENST00000366871 SPATA20Q8TB22 786 aa23.56■■□□□ 1.36
T-202ENST00000366871 BRMS1Q9HCU9 246 aa23.56■■□□□ 1.36
T-202ENST00000366871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
T-202ENST00000366871 PCDHB6Q9Y5E3 794 aa23.56■■□□□ 1.36
T-202ENST00000366871 TRIM75PA6NK02 468 aa23.55■■□□□ 1.36
T-202ENST00000366871 SERPINC1P01008 464 aa23.55■■□□□ 1.36
T-202ENST00000366871 NR5A1Q13285 461 aa23.55■■□□□ 1.36
T-202ENST00000366871 SBK1Q52WX2 424 aa23.55■■□□□ 1.36
T-202ENST00000366871 FERMT2Q96AC1 680 aa23.55■■□□□ 1.36
T-202ENST00000366871 DLEC1Q9Y238 1755 aa23.55■■□□□ 1.36
T-202ENST00000366871 ENOX1Q8TC92 643 aaKnown RBP23.54■■□□□ 1.36
T-202ENST00000366871 TSC1Q92574 1164 aa23.54■■□□□ 1.36
T-202ENST00000366871 CRNKL1Q9BZJ0 848 aaKnown RBP23.54■■□□□ 1.36
T-202ENST00000366871 CABP5Q9NP86 173 aa23.54■■□□□ 1.36
T-202ENST00000366871 USP27XA6NNY8 438 aa23.54■■□□□ 1.36
T-202ENST00000366871 CELF1Q92879 486 aaKnown RBP23.54■■□□□ 1.36
T-202ENST00000366871 SMARCE1Q969G3 411 aa23.54■■□□□ 1.36
T-202ENST00000366871 POLR2DO15514 142 aaKnown RBP23.53■■□□□ 1.36
T-202ENST00000366871 MORC3Q14149 939 aa23.53■■□□□ 1.36
T-202ENST00000366871 VSTM4Q8IW00 320 aa23.53■■□□□ 1.36
T-202ENST00000366871 CCDC82Q8N4S0 544 aa23.53■■□□□ 1.36
T-202ENST00000366871 ZNF384Q8TF68 577 aa23.53■■□□□ 1.36
T-202ENST00000366871 ARPP21Q9UBL0 812 aaPredicted RBP23.53■■□□□ 1.36
T-202ENST00000366871 MAN1B1Q9UKM7 699 aa23.53■■□□□ 1.36
T-202ENST00000366871 RPS6KA4O75676 772 aa23.53■■□□□ 1.36
T-202ENST00000366871 ATP1A3P13637 1013 aa23.53■■□□□ 1.36
T-202ENST00000366871 HIBADHP31937 336 aaKnown RBP23.53■■□□□ 1.36
T-202ENST00000366871 E4F1Q66K89 784 aaPredicted RBP23.53■■□□□ 1.36
T-202ENST00000366871 ISM2Q6H9L7 571 aa23.53■■□□□ 1.36
T-202ENST00000366871 PDCL2Q8N4E4 241 aa23.53■■□□□ 1.36
T-202ENST00000366871 SETDB2Q96T68 719 aa23.53■■□□□ 1.36
T-202ENST00000366871 ERCC5P28715 1186 aaPredicted RBP23.52■■□□□ 1.36
T-202ENST00000366871 DYNLL1P63167 89 aaKnown RBP23.52■■□□□ 1.36
T-202ENST00000366871 TBC1D9BQ66K14 1250 aa23.52■■□□□ 1.36
T-202ENST00000366871 TMTC3Q6ZXV5 915 aa23.52■■□□□ 1.36
T-202ENST00000366871 FCHSD1Q86WN1 690 aa23.52■■□□□ 1.36
T-202ENST00000366871 OXER1Q8TDS5 423 aa23.52■■□□□ 1.36
T-202ENST00000366871 TMX1Q9H3N1 280 aa23.52■■□□□ 1.36
T-202ENST00000366871 BMP6P22004 513 aa23.52■■□□□ 1.36
T-202ENST00000366871 CMTR1Q8N1G2 835 aaKnown RBP23.52■■□□□ 1.36
T-202ENST00000366871 LTBP4Q8N2S1 1624 aa23.51■■□□□ 1.35
T-202ENST00000366871 MYH6P13533 1939 aa23.51■■□□□ 1.35
T-202ENST00000366871 USP17L12C9JPN9 530 aa23.51■■□□□ 1.35
T-202ENST00000366871 USP17L21D6R901 530 aa23.51■■□□□ 1.35
T-202ENST00000366871 ACTN4O43707 911 aaKnown RBP23.51■■□□□ 1.35
T-202ENST00000366871 MECOMQ03112 1051 aa23.51■■□□□ 1.35
T-202ENST00000366871 CFAP100Q494V2 611 aa23.51■■□□□ 1.35
T-202ENST00000366871 TPTE2Q6XPS3 522 aa23.51■■□□□ 1.35
T-202ENST00000366871 FANCLQ9NW38 375 aa23.51■■□□□ 1.35
T-202ENST00000366871 SERTAD1Q9UHV2 236 aa23.51■■□□□ 1.35
T-202ENST00000366871 TRAPPC10P48553 1259 aa23.5■■□□□ 1.35
T-202ENST00000366871 SPTY2D1Q68D10 685 aaPredicted RBP23.5■■□□□ 1.35
T-202ENST00000366871 V9GY48 417 aaPredicted RBP23.5■■□□□ 1.35
T-202ENST00000366871 COL24A1Q17RW2 1714 aa23.5■■□□□ 1.35
T-202ENST00000366871 CASZ1Q86V15 1759 aa23.5■■□□□ 1.35
T-202ENST00000366871 NCBP1Q09161 790 aaKnown RBP23.5■■□□□ 1.35
T-202ENST00000366871 CTCFLQ8NI51 663 aaPredicted RBP23.5■■□□□ 1.35
T-202ENST00000366871 PYM1Q9BRP8 204 aaKnown RBP23.5■■□□□ 1.35
T-202ENST00000366871 CSRNP2Q9H175 543 aa23.5■■□□□ 1.35
T-202ENST00000366871 DCP1AQ9NPI6 582 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms