RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 C19orf81C9J6K1 198 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 GDF11O95390 407 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 SGPL1O95470 568 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 TFRCP02786 760 aaKnown RBP9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 USP5P45974 858 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 BACE1P56817 501 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 DYNLL1P63167 89 aaKnown RBP9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 MAP3K12Q12852 859 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 DIEXFQ68CQ4 756 aaKnown RBP9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 CEP85Q6P2H3 762 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 AACSQ86V21 672 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 MIGA1Q8NAN2 632 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 EAF2Q96CJ1 260 aaPredicted RBP9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 DNAJC18Q9H819 358 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 GINM1Q9NU53 330 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 ZBTB21Q9ULJ3 1066 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 EXOC6BQ9Y2D4 811 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 ZBED9Q6R2W3 1325 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 NAV1Q8NEY1 1877 aa9.97□□□□□ -0.81
RNU4-59P-201ENST00000364447 USP17L10C9JJH3 530 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 HMGCRP04035 888 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 CAPN2P17655 700 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 HSP90AB4PQ58FF6 505 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 CHRDL2Q6WN34 429 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 UBE2Q1Q7Z7E8 422 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 METTL16Q86W50 562 aaKnown RBP9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 MAGEB6Q8N7X4 407 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 PANK1Q8TE04 598 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 DEFB118Q96PH6 123 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 FEZ1Q99689 392 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 MORF4L1Q9UBU8 362 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 NR2E3Q9Y5X4 410 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 NDUFB9Q9Y6M9 179 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 PLXNB2O15031 1838 aa9.96□□□□□ -0.82
RNU4-59P-201ENST00000364447 GH2P01242 217 aa9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 MS4A1P11836 297 aa9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 HOXA7P31268 230 aaPredicted RBP9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 FXR1P51114 621 aaKnown RBP eCLIP9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 HERVK_113P62684 666 aa9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 JAG1P78504 1218 aa9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 SHROOM1Q2M3G4 852 aaPredicted RBP9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 TMED8Q6PL24 325 aaPredicted RBP9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 CCAR1Q8IX12 1150 aaKnown RBP9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 PAK6Q9NQU5 681 aaPredicted RBP9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 SERPINB13Q9UIV8 391 aa9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 DDX60LQ5H9U9 1706 aaKnown RBP9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 MYH8P13535 1937 aa9.95□□□□□ -0.82
RNU4-59P-201ENST00000364447 APBB1O00213 710 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 EVI5O60447 810 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 PDE3AQ14432 1141 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 TTF1Q15361 905 aaPredicted RBP9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 ZYXQ15942 572 aaKnown RBP9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 USP17L2Q6R6M4 530 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 TTC6Q86TZ1 520 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 CLASRPQ8N2M8 674 aaKnown RBP9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 GPRC5AQ8NFJ5 357 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 RHPN1Q8TCX5 695 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 GTF3C2Q8WUA4 911 aaPredicted RBP9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 SOCS4Q8WXH5 440 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 P2RX7Q99572 595 aaKnown RBP9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 PAGR1Q9BTK6 254 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 BCL11AQ9H165 835 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 EHD4Q9H223 541 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 ANTXR1Q9H6X2 564 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 CWC22Q9HCG8 908 aaKnown RBP9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 IL1RAPL2Q9NP60 686 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 TRIOBPQ9H2D6 2365 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 ALPK3Q96L96 1907 aa9.94□□□□□ -0.82
RNU4-59P-201ENST00000364447 RPTORQ8N122 1335 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 MAGEB6P1A0A0J9YX57 407 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 HMMRO75330 724 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 IFIT2P09913 472 aaKnown RBP9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 MAPK4P31152 587 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 RAB3GAP1Q15042 981 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 ABCB5Q2M3G0 1257 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 CERKLQ49MI3 558 aaPredicted RBP9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 CRNKL1Q9BZJ0 848 aaKnown RBP9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 TXNRD2Q9NNW7 524 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 HMX1Q9NP08 348 aaPredicted RBP9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 CABP5Q9NP86 173 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 GJD2Q9UKL4 321 aa9.93□□□□□ -0.82
RNU4-59P-201ENST00000364447 PEX10O60683 326 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 ZKSCAN1P17029 563 aaPredicted RBP9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 CYP2B6P20813 491 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 USP14P54578 494 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 ERVK-9P63128 1117 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 ERVK-24P63145 666 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 TRIM32Q13049 653 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 SLC9C2Q5TAH2 1124 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 TATDN1Q6P1N9 297 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 NECAB2Q7Z6G3 386 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 TRMT44Q8IYL2 757 aaKnown RBP9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 ANKLE1Q8NAG6 615 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 TRIB2Q92519 343 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 KIF1BPQ96EK5 621 aa9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 PAWRQ96IZ0 340 aaKnown RBP9.92□□□□□ -0.82
RNU4-59P-201ENST00000364447 DNAJC2Q99543 621 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms