RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 RAP1GAPP47736 663 aa8.79□□□□□ -1
RNU4-40P-201ENST00000364351 TMEM67Q5HYA8 995 aa8.79□□□□□ -1
RNU4-40P-201ENST00000364351 LCE4AQ5TA78 99 aa8.79□□□□□ -1
RNU4-40P-201ENST00000364351 PRR23BQ6ZRT6 265 aa8.79□□□□□ -1
RNU4-40P-201ENST00000364351 NPAS4Q8IUM7 802 aa8.79□□□□□ -1
RNU4-40P-201ENST00000364351 MFSD2AQ8NA29 543 aa8.79□□□□□ -1
RNU4-40P-201ENST00000364351 TTF2Q9UNY4 1162 aaKnown RBP8.79□□□□□ -1
RNU4-40P-201ENST00000364351 CBX7O95931 251 aa8.78□□□□□ -1
RNU4-40P-201ENST00000364351 ZNF865P0CJ78 1059 aaPredicted RBP8.78□□□□□ -1
RNU4-40P-201ENST00000364351 XAGE3Q8WTP9 111 aa8.78□□□□□ -1
RNU4-40P-201ENST00000364351 ASB16Q96NS5 453 aa8.78□□□□□ -1
RNU4-40P-201ENST00000364351 CDK8P49336 464 aa8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 WIPI1Q5MNZ9 446 aaPredicted RBP8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 LETMD1Q6P1Q0 360 aa8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 C22orf34Q6ZV56 151 aa8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 SYDE1Q6ZW31 735 aaPredicted RBP8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 HID1Q8IV36 788 aa8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 C19orf73Q9NVV2 129 aa8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 SNCAIPQ9Y6H5 919 aa8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 CAPN6Q9Y6Q1 641 aa8.77□□□□□ -1.01
RNU4-40P-201ENST00000364351 RBAK-RBAKDNI3L0D1 243 aa8.76□□□□□ -1.01
RNU4-40P-201ENST00000364351 GDNFP39905 211 aa8.76□□□□□ -1.01
RNU4-40P-201ENST00000364351 TTBK2Q6IQ55 1244 aa8.76□□□□□ -1.01
RNU4-40P-201ENST00000364351 SV2BQ7L1I2 683 aa8.76□□□□□ -1.01
RNU4-40P-201ENST00000364351 GAL3ST3Q96A11 431 aa8.76□□□□□ -1.01
RNU4-40P-201ENST00000364351 PPP1R16BQ96T49 567 aa8.76□□□□□ -1.01
RNU4-40P-201ENST00000364351 ST14Q9Y5Y6 855 aa8.76□□□□□ -1.01
RNU4-40P-201ENST00000364351 CAP2P40123 477 aa8.75□□□□□ -1.01
RNU4-40P-201ENST00000364351 PRAMEF13Q5VWM6 474 aa8.75□□□□□ -1.01
RNU4-40P-201ENST00000364351 UBE2FQ969M7 185 aa8.75□□□□□ -1.01
RNU4-40P-201ENST00000364351 TOX2Q96NM4 488 aa8.75□□□□□ -1.01
RNU4-40P-201ENST00000364351 ZSWIM5Q9P217 1185 aa8.75□□□□□ -1.01
RNU4-40P-201ENST00000364351 CFPP27918 469 aa8.74□□□□□ -1.01
RNU4-40P-201ENST00000364351 GRK4P32298 578 aa8.74□□□□□ -1.01
RNU4-40P-201ENST00000364351 ZNF746Q6NUN9 644 aaPredicted RBP8.74□□□□□ -1.01
RNU4-40P-201ENST00000364351 CILP2Q8IUL8 1156 aa8.74□□□□□ -1.01
RNU4-40P-201ENST00000364351 DIRC2Q96SL1 478 aa8.74□□□□□ -1.01
RNU4-40P-201ENST00000364351 KRTAP4-9Q9BYQ8 210 aa8.74□□□□□ -1.01
RNU4-40P-201ENST00000364351 TSPAN15O95858 294 aa8.73□□□□□ -1.01
RNU4-40P-201ENST00000364351 CST3P01034 146 aaPredicted RBP8.73□□□□□ -1.01
RNU4-40P-201ENST00000364351 LMNB1P20700 586 aa8.73□□□□□ -1.01
RNU4-40P-201ENST00000364351 KRTAP19-4Q3LI73 84 aa8.73□□□□□ -1.01
RNU4-40P-201ENST00000364351 CDH24Q86UP0 819 aa8.73□□□□□ -1.01
RNU4-40P-201ENST00000364351 IVNS1ABPQ9Y6Y0 642 aa8.73□□□□□ -1.01
RNU4-40P-201ENST00000364351 LDHBP07195 334 aaKnown RBP8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 P4HBP07237 508 aaKnown RBP8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 CYP7A1P22680 504 aa8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 THAP5Q7Z6K1 395 aa8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 ZSCAN18Q8TBC5 510 aaPredicted RBP8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 CCDC120Q96HB5 630 aa8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 ALPK1Q96QP1 1244 aa8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 SLAMF8Q9P0V8 285 aa8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 PCDHB5Q9Y5E4 795 aa8.72□□□□□ -1.01
RNU4-40P-201ENST00000364351 TNK2Q07912 1038 aa8.71□□□□□ -1.02
RNU4-40P-201ENST00000364351 SEPT6Q14141 434 aa8.71□□□□□ -1.02
RNU4-40P-201ENST00000364351 TTC6Q86TZ1 520 aa8.71□□□□□ -1.02
RNU4-40P-201ENST00000364351 C1QTNF9P0C862 333 aa8.7□□□□□ -1.02
RNU4-40P-201ENST00000364351 EIF4BP23588 611 aaKnown RBP8.7□□□□□ -1.02
RNU4-40P-201ENST00000364351 CCDC85BQ15834 202 aaPredicted RBP8.7□□□□□ -1.02
RNU4-40P-201ENST00000364351 LRRC56Q8IYG6 542 aaPredicted RBP8.7□□□□□ -1.02
RNU4-40P-201ENST00000364351 FBXO15Q8NCQ5 510 aaPredicted RBP8.7□□□□□ -1.02
RNU4-40P-201ENST00000364351 FRMD6Q96NE9 622 aa8.7□□□□□ -1.02
RNU4-40P-201ENST00000364351 GFRA2O00451 464 aa8.69□□□□□ -1.02
RNU4-40P-201ENST00000364351 NFIBO00712 420 aa8.69□□□□□ -1.02
RNU4-40P-201ENST00000364351 KIR3DL1P43629 444 aa8.69□□□□□ -1.02
RNU4-40P-201ENST00000364351 ABHD4Q8TB40 342 aa8.69□□□□□ -1.02
RNU4-40P-201ENST00000364351 DPH2Q9BQC3 489 aaPredicted RBP8.69□□□□□ -1.02
RNU4-40P-201ENST00000364351 KCNK12Q9HB15 430 aa8.69□□□□□ -1.02
RNU4-40P-201ENST00000364351 PGRP06401 933 aa8.68□□□□□ -1.02
RNU4-40P-201ENST00000364351 RAC2P15153 192 aa8.68□□□□□ -1.02
RNU4-40P-201ENST00000364351 RPS26P62854 115 aaKnown RBP8.68□□□□□ -1.02
RNU4-40P-201ENST00000364351 MAP3K11Q16584 847 aa8.68□□□□□ -1.02
RNU4-40P-201ENST00000364351 C1QL4Q86Z23 238 aa8.68□□□□□ -1.02
RNU4-40P-201ENST00000364351 COX4I2Q96KJ9 171 aa8.68□□□□□ -1.02
RNU4-40P-201ENST00000364351 TJP2Q9UDY2 1190 aa8.68□□□□□ -1.02
RNU4-40P-201ENST00000364351 DNAJC25-GNG10A0A024R161 153 aa8.67□□□□□ -1.02
RNU4-40P-201ENST00000364351 GNA15P30679 374 aa8.67□□□□□ -1.02
RNU4-40P-201ENST00000364351 HK2P52789 917 aa8.67□□□□□ -1.02
RNU4-40P-201ENST00000364351 RALGPS1Q5JS13 557 aa8.67□□□□□ -1.02
RNU4-40P-201ENST00000364351 WASH4PA8MWX3 477 aa8.66□□□□□ -1.02
RNU4-40P-201ENST00000364351 ESR1P03372 595 aa8.66□□□□□ -1.02
RNU4-40P-201ENST00000364351 KRT1P04264 644 aa8.66□□□□□ -1.02
RNU4-40P-201ENST00000364351 TMEM253P0C7T8 217 aa8.66□□□□□ -1.02
RNU4-40P-201ENST00000364351 ERVFC1P60507 584 aa8.66□□□□□ -1.02
RNU4-40P-201ENST00000364351 LCNL1Q6ZST4 164 aa8.66□□□□□ -1.02
RNU4-40P-201ENST00000364351 CREG2Q8IUH2 290 aa8.66□□□□□ -1.02
RNU4-40P-201ENST00000364351 DCP1AQ9NPI6 582 aaPredicted RBP8.66□□□□□ -1.02
RNU4-40P-201ENST00000364351 ZSCAN22P10073 491 aaPredicted RBP8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 SLC6A19Q695T7 634 aa8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 TMPRSS7Q7RTY8 843 aa8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 MRPL41Q8IXM3 137 aaKnown RBP8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 MYLIPQ8WY64 445 aa8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 TMEM87BQ96K49 555 aa8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 EPB41L4BQ9H329 900 aa8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 TACC3Q9Y6A5 838 aa8.65□□□□□ -1.02
RNU4-40P-201ENST00000364351 ETV3P41162 512 aa8.64□□□□□ -1.03
RNU4-40P-201ENST00000364351 LIG3P49916 1009 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms