RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PICK1Q9NRD5 415 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 ABCA10Q8WWZ4 1543 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 TLDC2A0PJX2 215 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 SLC22A31A6NKX4 558 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 ELNP15502 786 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 GUCY2CP25092 1073 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 DDR2Q16832 855 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 ZBTB37Q5TC79 503 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 LARP1BQ659C4 914 aaKnown RBP8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 IGF2-ASQ6U949 168 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 SCARF2Q96GP6 870 aaPredicted RBP8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 MRPL18Q9H0U6 180 aaKnown RBP8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 SUGCTQ9HAC7 445 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 ST7Q9NRC1 585 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 DISC1Q9NRI5 854 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 SNTG2Q9NY99 539 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 KLHL3Q9UH77 587 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 ADAM30Q9UKF2 790 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 AP4E1Q9UPM8 1137 aa8.3□□□□□ -1.08
RNU4-39P-201ENST00000362455 A0A1W2PQH9 124 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 CCDC85CA6NKD9 419 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 FANCGO15287 622 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 ADH5P11766 374 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 NTF4P34130 210 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 RASA3Q14644 834 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 TTC6Q86TZ1 520 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 SMG8Q8ND04 991 aaKnown RBP8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 ACSF2Q96CM8 615 aaPredicted RBP8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 ATG4CQ96DT6 458 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 FANCD2OSQ96PS1 177 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 DEPDC7Q96QD5 511 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 CYP4F12Q9HCS2 524 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 TBX22Q9Y458 520 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 WDR97A6NE52 1622 aa8.29□□□□□ -1.08
RNU4-39P-201ENST00000362455 FAM221BA6H8Z2 402 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 NME1P15531 152 aaKnown RBP8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 FXNQ16595 210 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 PRRT3Q5FWE3 981 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 NLRC3Q7RTR2 1065 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 JAZF1Q86VZ6 243 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 TAB3Q8N5C8 712 aaPredicted RBP8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 RNF214Q8ND24 703 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 MICAL1Q8TDZ2 1067 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 ATXN3LQ9H3M9 355 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 CNNM2Q9H8M5 875 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 NOP53Q9NZM5 478 aaKnown RBP8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 TJP2Q9UDY2 1190 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 MSRB2Q9Y3D2 182 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 NUP160Q12769 1436 aa8.28□□□□□ -1.08
RNU4-39P-201ENST00000362455 GRIN2AQ12879 1464 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 CHURC1-FNTBB4DL54 471 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 ACRP10323 421 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 DRD2P14416 443 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 SOX4Q06945 474 aaPredicted RBP8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 ARSHQ5FYA8 562 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 SHISA2Q6UWI4 295 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 LRP10Q7Z4F1 713 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 AGGF1Q8N302 714 aaeCLIP8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 STK17AQ9UEE5 414 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 MAPK8IP1Q9UQF2 711 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 CNTNAP5Q8WYK1 1306 aa8.27□□□□□ -1.09
RNU4-39P-201ENST00000362455 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 TIAF1O95411 115 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 NEFMP07197 916 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 HCLS1P14317 486 aaPredicted RBP8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 CANXP27824 592 aaKnown RBP8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 TTLL4Q14679 1199 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 ZYXQ15942 572 aaKnown RBP8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 GRIK4Q16099 956 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 FDX2Q6P4F2 183 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 DYMQ7RTS9 669 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 MCATQ8IVS2 390 aaKnown RBP8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 C12orf50Q8NA57 414 aaPredicted RBP8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 FAM13CQ8NE31 585 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 ZNF507Q8TCN5 953 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 SLC9A7Q96T83 725 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 CCDC113Q9H0I3 377 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 FBRSQ9HAH7 460 aa8.26□□□□□ -1.09
RNU4-39P-201ENST00000362455 B2RBV5 119 aa8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 F8W735 103 aaPredicted RBP8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 TNFRSF10CO14798 259 aa8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 INTS3Q68E01 1043 aaKnown RBP8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 SDE2Q6IQ49 451 aa8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 UNC5AQ6ZN44 842 aa8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 UBE3DQ7Z6J8 389 aa8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 HID1Q8IV36 788 aa8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 NLGN1Q8N2Q7 840 aa8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 TMEM87BQ96K49 555 aa8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 MRPL42Q9Y6G3 142 aaKnown RBP8.25□□□□□ -1.09
RNU4-39P-201ENST00000362455 CEP170Q5SW79 1584 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 WRNQ14191 1432 aaPredicted RBP eCLIP8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 FAM86C2PA6NEL3 165 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 DDAH1O94760 285 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 GJB6O95452 261 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 RAG1P15918 1043 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 YARSP54577 528 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms