RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ENPP3O14638 875 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 TIAF1O95411 115 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 GJB6O95452 261 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 ADH5P11766 374 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 HSD3B2P26439 372 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 CAP2P40123 477 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 SOX4Q06945 474 aaPredicted RBP5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 TRIM28Q13263 835 aaKnown RBP5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 ZYXQ15942 572 aaKnown RBP5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 ARSHQ5FYA8 562 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 SLC6A19Q695T7 634 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 HID1Q8IV36 788 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 FAM178BQ8IXR5 827 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 TMEM130Q8N3G9 435 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 KCT2Q8NC54 265 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 ZNF669Q96BR6 464 aaPredicted RBP5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 MKL2Q9ULH7 1088 aa5.55□□□□□ -1.52
RNU6-28P-201ENST00000362378 LTBP3Q9NS15 1303 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 UPK3BL1B0FP48 263 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 UPK3BL2E5RIL1 263 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 NEFMP07197 916 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 CCNFP41002 786 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 YARSP54577 528 aaKnown RBP5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 IFRD2Q12894 506 aaPredicted RBP5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 NCAPHQ15003 741 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 TCEAL1Q15170 157 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 C6orf15Q6UXA7 325 aaPredicted RBP5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 LILRB2Q8N423 598 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 TMEM151AQ8N4L1 468 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 FAM13CQ8NE31 585 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 TMEM87BQ96K49 555 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 DNAJC7Q99615 494 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 PHAXQ9H814 394 aaKnown RBP5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 PICK1Q9NRD5 415 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 KLHL3Q9UH77 587 aa5.54□□□□□ -1.52
RNU6-28P-201ENST00000362378 CCDC85CA6NKD9 419 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 B2RBV5 119 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 F8W735 103 aaPredicted RBP5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 RGS13O14921 159 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 DDAH1O94760 285 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 RAG1P15918 1043 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 GSK3AP49840 483 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 TTLL4Q14679 1199 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 ANKRD34AQ69YU3 496 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 ZNF662Q6ZS27 426 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 JMYQ8N9B5 988 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 C2CD4AQ8NCU7 369 aaPredicted RBP5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 ST13P5Q8NFI4 369 aaPredicted RBP5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 FBRSQ9HAH7 460 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 NOP53Q9NZM5 478 aaKnown RBP5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 ZNF214Q9UL59 606 aaPredicted RBP5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 AP4E1Q9UPM8 1137 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 SBNO2Q9Y2G9 1366 aa5.53□□□□□ -1.52
RNU6-28P-201ENST00000362378 ANKRD62A6NC57 917 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 BTBD11A6QL63 1104 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 FAM229AH3BQW9 127 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 CST3P01034 146 aaPredicted RBP5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 DRD2P14416 443 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 NCLP19338 710 aaKnown RBP5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 SLBPQ14493 270 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 NKG7Q16617 165 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 PRRT3Q5FWE3 981 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 MRM1Q6IN84 353 aaKnown RBP5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 VHLLQ6RSH7 139 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 Q6ZS46 218 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 C12orf50Q8NA57 414 aaPredicted RBP5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 KLHL6Q8WZ60 621 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 ISL2Q96A47 359 aa5.52□□□□□ -1.53
RNU6-28P-201ENST00000362378 HMGB1P09429 215 aaKnown RBP5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 HCLS1P14317 486 aaPredicted RBP5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 POLR2BP30876 1174 aaKnown RBP5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 ASPAP45381 313 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 SLC7A5Q01650 507 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 PLEKHG4Q58EX7 1191 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 FDX2Q6P4F2 183 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 CDC37L1Q7L3B6 337 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 DYMQ7RTS9 669 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 UBE3DQ7Z6J8 389 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 SH3TC2Q8TF17 1288 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 LENG1Q96BZ8 264 aaPredicted RBP5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 DHRS1Q96LJ7 313 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 CCDC74BQ96LY2 380 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 EPN3Q9H201 632 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 FAM105AQ9NUU6 356 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 ACTL7BQ9Y614 415 aa5.51□□□□□ -1.53
RNU6-28P-201ENST00000362378 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 UBOX5O94941 541 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 CLSTN1O94985 981 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 HSP90B1P14625 803 aaKnown RBP5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 PMS1P54277 932 aaKnown RBP5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 CHMP4BP1P59074 171 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 BBS9Q3SYG4 887 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 MTERF2Q49AM1 385 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 C2orf27AQ580R0 203 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 PRAMEF13Q5VWM6 474 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 EEPD1Q7L9B9 569 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 SMYD4Q8IYR2 804 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms