RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ATAD5Q96QE3 1844 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 ATRNL1Q5VV63 1379 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 TNNI2P48788 182 aa24.37■■□□□ 1.49
SHISA4-201ENST00000362011 DHX32Q7L7V1 743 aaKnown RBP24.37■■□□□ 1.49
SHISA4-201ENST00000362011 FAM83AQ86UY5 434 aa24.37■■□□□ 1.49
SHISA4-201ENST00000362011 ZSCAN29Q8IWY8 852 aaPredicted RBP24.37■■□□□ 1.49
SHISA4-201ENST00000362011 ZFPM1Q8IX07 1006 aa24.37■■□□□ 1.49
SHISA4-201ENST00000362011 MB21D2Q8IYB1 491 aaPredicted RBP24.37■■□□□ 1.49
SHISA4-201ENST00000362011 SAGE1Q9NXZ1 904 aa24.37■■□□□ 1.49
SHISA4-201ENST00000362011 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.37■■□□□ 1.49
SHISA4-201ENST00000362011 B4E1Z4 1266 aa24.36■■□□□ 1.49
SHISA4-201ENST00000362011 ADM5C9JUS6 153 aa24.36■■□□□ 1.49
SHISA4-201ENST00000362011 FGRP09769 529 aa24.36■■□□□ 1.49
SHISA4-201ENST00000362011 TNFAIP1Q13829 316 aa24.36■■□□□ 1.49
SHISA4-201ENST00000362011 RRP12Q5JTH9 1297 aaKnown RBP24.36■■□□□ 1.49
SHISA4-201ENST00000362011 CCDC102AQ96A19 550 aa24.36■■□□□ 1.49
SHISA4-201ENST00000362011 DCPSQ96C86 337 aaKnown RBP24.36■■□□□ 1.49
SHISA4-201ENST00000362011 INCENPQ9NQS7 918 aa24.36■■□□□ 1.49
SHISA4-201ENST00000362011 PDRG1Q9NUG6 133 aa24.36■■□□□ 1.49
SHISA4-201ENST00000362011 ORC4O43929 436 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 MCM5P33992 734 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 C16orf86Q6ZW13 317 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 C2orf69Q8N8R5 385 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 SNX21Q969T3 373 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 DYNLL2Q96FJ2 89 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 TTC14Q96N46 770 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 ZNF287Q9HBT7 754 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 GREB1LQ9C091 1923 aaPredicted RBP24.35■■□□□ 1.49
SHISA4-201ENST00000362011 MYH4Q9Y623 1939 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 DDTLA6NHG4 134 aaPredicted RBP24.35■■□□□ 1.49
SHISA4-201ENST00000362011 DGKZQ13574 1117 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 COL9A3Q14050 684 aaPredicted RBP24.35■■□□□ 1.49
SHISA4-201ENST00000362011 APOBEC3FQ8IUX4 373 aaKnown RBP24.35■■□□□ 1.49
SHISA4-201ENST00000362011 ESR2Q92731 530 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 EHD4Q9H223 541 aa24.35■■□□□ 1.49
SHISA4-201ENST00000362011 WDR19Q8NEZ3 1342 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 NT5C2P49902 561 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 EXOSC10Q01780 885 aaKnown RBP24.34■■□□□ 1.49
SHISA4-201ENST00000362011 BECN1Q14457 450 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 SH3BP5LQ7L8J4 393 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 HSCBQ8IWL3 235 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 PI4KBQ9UBF8 816 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 SWAP70Q9UH65 585 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 SERPINB13Q9UIV8 391 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 TAOK2Q9UL54 1235 aa24.34■■□□□ 1.49
SHISA4-201ENST00000362011 ASTN2O75129 1339 aaPredicted RBP24.33■■□□□ 1.49
SHISA4-201ENST00000362011 PRC1O43663 620 aa24.33■■□□□ 1.48
SHISA4-201ENST00000362011 KDM4AO75164 1064 aa24.33■■□□□ 1.48
SHISA4-201ENST00000362011 CDK8P49336 464 aa24.33■■□□□ 1.48
SHISA4-201ENST00000362011 MCM2P49736 904 aa24.33■■□□□ 1.48
SHISA4-201ENST00000362011 KIF23Q02241 960 aaPredicted RBP24.33■■□□□ 1.48
SHISA4-201ENST00000362011 CYB5R4Q7L1T6 521 aa24.33■■□□□ 1.48
SHISA4-201ENST00000362011 TCEANC2Q96MN5 208 aa24.33■■□□□ 1.48
SHISA4-201ENST00000362011 ALDH8A1Q9H2A2 487 aaPredicted RBP24.33■■□□□ 1.48
SHISA4-201ENST00000362011 MKNK2Q9HBH9 465 aa24.33■■□□□ 1.48
SHISA4-201ENST00000362011 RANBP6O60518 1105 aaKnown RBP24.32■■□□□ 1.48
SHISA4-201ENST00000362011 PRDM1O75626 825 aa24.32■■□□□ 1.48
SHISA4-201ENST00000362011 CD2BP2O95400 341 aaKnown RBP24.32■■□□□ 1.48
SHISA4-201ENST00000362011 AK2P54819 239 aa24.32■■□□□ 1.48
SHISA4-201ENST00000362011 GABPAQ06546 454 aa24.32■■□□□ 1.48
SHISA4-201ENST00000362011 ANGEL2Q5VTE6 544 aaKnown RBP24.32■■□□□ 1.48
SHISA4-201ENST00000362011 CRACR2BQ8N4Y2 399 aaPredicted RBP24.32■■□□□ 1.48
SHISA4-201ENST00000362011 GGA3Q9NZ52 723 aa24.32■■□□□ 1.48
SHISA4-201ENST00000362011 PITPNM2Q9BZ72 1349 aa24.32■■□□□ 1.48
SHISA4-201ENST00000362011 SLC10A3P09131 477 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 ANTXR2P58335 489 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 RASA3Q14644 834 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 ANKRD1Q15327 319 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 Q6ZUG5 572 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 CHST3Q7LGC8 479 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 FOXP4Q8IVH2 680 aaPredicted RBP24.31■■□□□ 1.48
SHISA4-201ENST00000362011 ZNF444Q8N0Y2 327 aaPredicted RBP24.31■■□□□ 1.48
SHISA4-201ENST00000362011 SLC44A5Q8NCS7 719 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 CSRNP1Q96S65 589 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 TRIM34Q9BYJ4 488 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 ZSWIM5Q9P217 1185 aa24.31■■□□□ 1.48
SHISA4-201ENST00000362011 ZNF157P51786 506 aaPredicted RBP24.3■■□□□ 1.48
SHISA4-201ENST00000362011 FGD1P98174 961 aa24.3■■□□□ 1.48
SHISA4-201ENST00000362011 SULF1Q8IWU6 871 aa24.3■■□□□ 1.48
SHISA4-201ENST00000362011 NKX2-3Q8TAU0 364 aa24.3■■□□□ 1.48
SHISA4-201ENST00000362011 TMEM87BQ96K49 555 aa24.3■■□□□ 1.48
SHISA4-201ENST00000362011 TBC1D2Q9BYX2 928 aa24.3■■□□□ 1.48
SHISA4-201ENST00000362011 TMEM39BQ9GZU3 492 aa24.3■■□□□ 1.48
SHISA4-201ENST00000362011 RNF186Q9NXI6 227 aa24.3■■□□□ 1.48
SHISA4-201ENST00000362011 RASA1P20936 1047 aa24.29■■□□□ 1.48
SHISA4-201ENST00000362011 CDCA5Q96FF9 252 aa24.29■■□□□ 1.48
SHISA4-201ENST00000362011 LRRC2Q9BYS8 371 aa24.29■■□□□ 1.48
SHISA4-201ENST00000362011 TSPY2A6NKD2 308 aa24.28■■□□□ 1.48
SHISA4-201ENST00000362011 TOB2Q14106 344 aaPredicted RBP24.28■■□□□ 1.48
SHISA4-201ENST00000362011 SART3Q15020 963 aaKnown RBP24.28■■□□□ 1.48
SHISA4-201ENST00000362011 METTL16Q86W50 562 aaKnown RBP24.28■■□□□ 1.48
SHISA4-201ENST00000362011 MTA3Q9BTC8 594 aa24.28■■□□□ 1.48
SHISA4-201ENST00000362011 DOCK1Q14185 1865 aa24.27■■□□□ 1.48
SHISA4-201ENST00000362011 K7ELQ4 463 aaPredicted RBP24.27■■□□□ 1.48
SHISA4-201ENST00000362011 NOL8Q76FK4 1167 aaKnown RBP24.27■■□□□ 1.48
SHISA4-201ENST00000362011 IQCA1Q86XH1 822 aa24.27■■□□□ 1.48
SHISA4-201ENST00000362011 FBXL16Q8N461 479 aa24.27■■□□□ 1.48
SHISA4-201ENST00000362011 UBAC1Q9BSL1 405 aa24.27■■□□□ 1.48
SHISA4-201ENST00000362011 AGXT2Q9BYV1 514 aa24.27■■□□□ 1.48
SHISA4-201ENST00000362011 DEFB129Q9H1M3 183 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms