RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 IDEP14735 1019 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 FGFR2P21802 821 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 KRT2P35908 639 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 MRE11P49959 708 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 UBE2HP62256 183 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 ABCB5Q2M3G0 1257 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 PNPLA7Q6ZV29 1317 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 ILDR1Q86SU0 546 aaPredicted RBP6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 ARHGEF10LQ9HCE6 1279 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 C6orf50Q9HD87 102 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 MROH7-TTC4A0A0A0MT08 1334 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 BTBD18B2RXH4 712 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 EPB41L2O43491 1005 aaKnown RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 IBSPP21815 317 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 TOB2Q14106 344 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 CERS3Q8IU89 383 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 CCDC148Q8NFR7 591 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 ERCC4Q92889 916 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 NAT10Q9H0A0 1025 aaKnown RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 BRPF3Q9ULD4 1205 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 DAGLAQ9Y4D2 1042 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 BAZ2BQ9UIF8 2168 aaKnown RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 MRC1P22897 1456 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 SNAP25P60880 206 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 ADGRA1Q86SQ6 560 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 SULF1Q8IWU6 871 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 TDRD7Q8NHU6 1098 aaKnown RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 NAP1L5Q96NT1 182 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 RBM28Q9NW13 759 aaKnown RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 VWA3AA6NCI4 1184 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 PSMD14O00487 310 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 CFBP00751 764 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 TM4SF1P30408 202 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 MKRN3Q13064 507 aaKnown RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 TNFAIP1Q13829 316 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 CCDC183Q5T5S1 534 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 RASGRP4Q8TDF6 673 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 SLC16A10Q8TF71 515 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 FTOQ9C0B1 505 aaKnown RBP eCLIP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 MTFR1LQ9H019 292 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 EPB41L4AQ9HCS5 686 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 TCP11L1Q9NUJ3 509 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 MTMR6Q9Y217 621 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 LRP6O75581 1613 aa6.3□□□□□ -1.4
PCDH11X-202ENST00000361655 SPDYE3A6NKU9 549 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 TMEM232C9JQI7 657 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 SH2B2O14492 632 aaPredicted RBP6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 SYKP43405 635 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 PLCD1P51178 756 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 SLFN13Q68D06 897 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 NSMFQ6X4W1 530 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 SAMD7Q7Z3H4 446 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 NSUN7Q8NE18 718 aaKnown RBP6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 LLPHQ9BRT6 129 aaKnown RBP6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 BIN2Q9UBW5 565 aaPredicted RBP6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 PLEKHG2Q9H7P9 1386 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 LETM1O95202 739 aaPredicted RBP6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 BRD1O95696 1058 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 SERPINC1P01008 464 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 GH2P01242 217 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 CALML3P27482 149 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 GRIK5Q16478 980 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 TMEM266Q2M3C6 531 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 KLHL40Q2TBA0 621 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 ANKRD20A12PQ8NF67 263 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 DHX58Q96C10 678 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 DCPSQ96C86 337 aaKnown RBP6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 PI4KBQ9UBF8 816 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 ZNRF3Q9ULT6 936 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 LMO7Q8WWI1 1683 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 SMIM22K7EJ46 135 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 ONECUT3O60422 494 aaPredicted RBP6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 PLEKHA8P1O95397 391 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 GNA11P29992 359 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 RASSF7Q02833 373 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 TMEM132AQ24JP5 1023 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 CCDC84Q86UT8 332 aaPredicted RBP6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 VGLL2Q8N8G2 317 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 ZBTB21Q9ULJ3 1066 aa6.29□□□□□ -1.4
PCDH11X-202ENST00000361655 SEPT2Q15019 361 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 ZSCAN23Q3MJ62 389 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 STYK1Q6J9G0 422 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 STAMQ92783 540 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 USP28Q96RU2 1077 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 BMP2KQ9NSY1 1161 aaPredicted RBP6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 PHRF1Q9P1Y6 1649 aaKnown RBP6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 ALS2Q96Q42 1657 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 ZMYM6O95789 1325 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 SMCO2A6NFE2 343 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 TOP1P11387 765 aaKnown RBP6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 LIG1P18858 919 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 PDE4CQ08493 712 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 NFIAQ12857 509 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 NR5A1Q13285 461 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 FILIP1Q7Z7B0 1213 aa6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 ENAHQ8N8S7 591 aaPredicted RBP6.28□□□□□ -1.4
PCDH11X-202ENST00000361655 KCNG4Q8TDN1 519 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms