RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 INPP5BP32019 993 aa30.02■■■□□ 2.4
SSBP3-202ENST00000357475 KRT32Q14532 448 aa30.02■■■□□ 2.4
SSBP3-202ENST00000357475 NCOA7Q8NI08 942 aa30.02■■■□□ 2.4
SSBP3-202ENST00000357475 TCEANC2Q96MN5 208 aa30.02■■■□□ 2.4
SSBP3-202ENST00000357475 ZSWIM5Q9P217 1185 aa30.02■■■□□ 2.4
SSBP3-202ENST00000357475 PCP11498 1178 aaKnown RBP30.01■■■□□ 2.4
SSBP3-202ENST00000357475 ANTXR2P58335 489 aa30.01■■■□□ 2.4
SSBP3-202ENST00000357475 TFAP4Q01664 338 aa30.01■■■□□ 2.4
SSBP3-202ENST00000357475 CERKLQ49MI3 558 aaPredicted RBP30.01■■■□□ 2.4
SSBP3-202ENST00000357475 ZNF444Q8N0Y2 327 aaPredicted RBP30.01■■■□□ 2.4
SSBP3-202ENST00000357475 SMC1BQ8NDV3 1235 aa30.01■■■□□ 2.4
SSBP3-202ENST00000357475 HOOK2Q96ED9 719 aa30.01■■■□□ 2.4
SSBP3-202ENST00000357475 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.01■■■□□ 2.4
SSBP3-202ENST00000357475 UPF3BQ9BZI7 483 aaKnown RBP30.01■■■□□ 2.4
SSBP3-202ENST00000357475 KRT23Q9C075 422 aa30.01■■■□□ 2.4
SSBP3-202ENST00000357475 DOCK1Q14185 1865 aa30.01■■■□□ 2.4
SSBP3-202ENST00000357475 CASTP20810 708 aaKnown RBP30.01■■■□□ 2.39
SSBP3-202ENST00000357475 RBM46Q8TBY0 533 aaKnown RBP30.01■■■□□ 2.39
SSBP3-202ENST00000357475 KLRG1Q96E93 195 aa30.01■■■□□ 2.39
SSBP3-202ENST00000357475 WRNIP1Q96S55 665 aa30.01■■■□□ 2.39
SSBP3-202ENST00000357475 ZKSCAN3Q9BRR0 538 aa30.01■■■□□ 2.39
SSBP3-202ENST00000357475 CNNM2Q9H8M5 875 aa30.01■■■□□ 2.39
SSBP3-202ENST00000357475 ZNF112Q9UJU3 913 aa30.01■■■□□ 2.39
SSBP3-202ENST00000357475 PASKQ96RG2 1323 aa30■■■□□ 2.39
SSBP3-202ENST00000357475 NMT2O60551 498 aa30■■■□□ 2.39
SSBP3-202ENST00000357475 CELF2O95319 508 aaKnown RBP30■■■□□ 2.39
SSBP3-202ENST00000357475 NF2P35240 595 aa30■■■□□ 2.39
SSBP3-202ENST00000357475 TRDNQ13061 729 aa30■■■□□ 2.39
SSBP3-202ENST00000357475 CST9Q5W186 159 aa30■■■□□ 2.39
SSBP3-202ENST00000357475 RALYLQ86SE5 291 aaKnown RBP30■■■□□ 2.39
SSBP3-202ENST00000357475 ZKSCAN4Q969J2 545 aaPredicted RBP30■■■□□ 2.39
SSBP3-202ENST00000357475 ZNF287Q9HBT7 754 aa30■■■□□ 2.39
SSBP3-202ENST00000357475 ANGEL1Q9UNK9 670 aaKnown RBP30■■■□□ 2.39
SSBP3-202ENST00000357475 CLEC10AQ8IUN9 316 aa29.99■■■□□ 2.39
SSBP3-202ENST00000357475 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.99■■■□□ 2.39
SSBP3-202ENST00000357475 ESR2Q92731 530 aa29.99■■■□□ 2.39
SSBP3-202ENST00000357475 TSPY2A6NKD2 308 aa29.98■■■□□ 2.39
SSBP3-202ENST00000357475 MPHOSPH10O00566 681 aaKnown RBP29.98■■■□□ 2.39
SSBP3-202ENST00000357475 GUCY1A2P33402 732 aa29.98■■■□□ 2.39
SSBP3-202ENST00000357475 CAP2P40123 477 aa29.98■■■□□ 2.39
SSBP3-202ENST00000357475 TTLL12Q14166 644 aaPredicted RBP29.98■■■□□ 2.39
SSBP3-202ENST00000357475 LRRC2Q9BYS8 371 aa29.98■■■□□ 2.39
SSBP3-202ENST00000357475 ZSWIM6Q9HCJ5 1215 aa29.98■■■□□ 2.39
SSBP3-202ENST00000357475 PPP1R12BO60237 982 aaPredicted RBP29.97■■■□□ 2.39
SSBP3-202ENST00000357475 GH2P01242 217 aa29.97■■■□□ 2.39
SSBP3-202ENST00000357475 TSPY3P0CV98 308 aa29.97■■■□□ 2.39
SSBP3-202ENST00000357475 TSPY8P0CW00 308 aa29.97■■■□□ 2.39
SSBP3-202ENST00000357475 ABCB5Q2M3G0 1257 aa29.97■■■□□ 2.39
SSBP3-202ENST00000357475 GPHNQ9NQX3 736 aaPredicted RBP29.97■■■□□ 2.39
SSBP3-202ENST00000357475 IL17RBQ9NRM6 502 aa29.97■■■□□ 2.39
SSBP3-202ENST00000357475 TAOK2Q9UL54 1235 aa29.97■■■□□ 2.39
SSBP3-202ENST00000357475 BLOC1S2Q6QNY1 142 aa29.96■■■□□ 2.39
SSBP3-202ENST00000357475 CCDC84Q86UT8 332 aaPredicted RBP29.96■■■□□ 2.39
SSBP3-202ENST00000357475 TM6SF1Q9BZW5 370 aa29.96■■■□□ 2.39
SSBP3-202ENST00000357475 UBE2Q2LH0YL09 131 aa29.96■■■□□ 2.39
SSBP3-202ENST00000357475 EXOSC10Q01780 885 aaKnown RBP29.96■■■□□ 2.39
SSBP3-202ENST00000357475 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.96■■■□□ 2.39
SSBP3-202ENST00000357475 RUFY3Q7L099 469 aa29.96■■■□□ 2.39
SSBP3-202ENST00000357475 NEDD1Q8NHV4 660 aa29.96■■■□□ 2.39
SSBP3-202ENST00000357475 ZBTB21Q9ULJ3 1066 aa29.96■■■□□ 2.39
SSBP3-202ENST00000357475 PLIN4Q96Q06 1357 aa29.95■■■□□ 2.38
SSBP3-202ENST00000357475 PRC1O43663 620 aa29.95■■■□□ 2.38
SSBP3-202ENST00000357475 RPS6KB1P23443 525 aa29.95■■■□□ 2.38
SSBP3-202ENST00000357475 SEPT2Q15019 361 aa29.95■■■□□ 2.38
SSBP3-202ENST00000357475 DHX32Q7L7V1 743 aaKnown RBP29.95■■■□□ 2.38
SSBP3-202ENST00000357475 CCDC17Q96LX7 622 aa29.95■■■□□ 2.38
SSBP3-202ENST00000357475 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.95■■■□□ 2.38
SSBP3-202ENST00000357475 PHIPQ8WWQ0 1821 aa29.94■■■□□ 2.38
SSBP3-202ENST00000357475 PSMA5P28066 241 aa29.94■■■□□ 2.38
SSBP3-202ENST00000357475 MCM5P33992 734 aa29.94■■■□□ 2.38
SSBP3-202ENST00000357475 CLMNQ96JQ2 1002 aa29.94■■■□□ 2.38
SSBP3-202ENST00000357475 GBA2Q9HCG7 927 aaPredicted RBP29.94■■■□□ 2.38
SSBP3-202ENST00000357475 IGKV6D-41A0A0C4DH26 115 aa29.93■■■□□ 2.38
SSBP3-202ENST00000357475 CTNND1O60716 968 aaKnown RBP29.93■■■□□ 2.38
SSBP3-202ENST00000357475 VGLL4Q14135 290 aa29.93■■■□□ 2.38
SSBP3-202ENST00000357475 MAP3K11Q16584 847 aa29.93■■■□□ 2.38
SSBP3-202ENST00000357475 CEP95Q96GE4 821 aa29.93■■■□□ 2.38
SSBP3-202ENST00000357475 SENP2Q9HC62 589 aa29.93■■■□□ 2.38
SSBP3-202ENST00000357475 CYP46A1Q9Y6A2 500 aa29.93■■■□□ 2.38
SSBP3-202ENST00000357475 IREB2P48200 963 aaKnown RBP29.92■■■□□ 2.38
SSBP3-202ENST00000357475 MAP3K9P80192 1104 aa29.92■■■□□ 2.38
SSBP3-202ENST00000357475 RAB3GAP1Q15042 981 aa29.92■■■□□ 2.38
SSBP3-202ENST00000357475 MYH4Q9Y623 1939 aa29.92■■■□□ 2.38
SSBP3-202ENST00000357475 TMEM179Q6ZVK1 233 aa29.91■■■□□ 2.38
SSBP3-202ENST00000357475 ARMC9Q7Z3E5 817 aa29.91■■■□□ 2.38
SSBP3-202ENST00000357475 SCYL3Q8IZE3 742 aa29.91■■■□□ 2.38
SSBP3-202ENST00000357475 SNCAIPQ9Y6H5 919 aa29.91■■■□□ 2.38
SSBP3-202ENST00000357475 HMGB1P09429 215 aaKnown RBP29.91■■■□□ 2.38
SSBP3-202ENST00000357475 NEK4P51957 841 aa29.91■■■□□ 2.38
SSBP3-202ENST00000357475 ZSCAN10Q96SZ4 725 aaPredicted RBP29.91■■■□□ 2.38
SSBP3-202ENST00000357475 TNKSO95271 1327 aa29.9■■■□□ 2.38
SSBP3-202ENST00000357475 FSTL1Q12841 308 aa29.9■■■□□ 2.38
SSBP3-202ENST00000357475 NOL9Q5SY16 702 aaKnown RBP29.9■■■□□ 2.38
SSBP3-202ENST00000357475 LDLRAD1Q5T700 205 aa29.9■■■□□ 2.38
SSBP3-202ENST00000357475 RCSD1Q6JBY9 416 aa29.9■■■□□ 2.38
SSBP3-202ENST00000357475 SIAH1Q8IUQ4 282 aa29.9■■■□□ 2.38
SSBP3-202ENST00000357475 ENAHQ8N8S7 591 aaPredicted RBP29.9■■■□□ 2.38
SSBP3-202ENST00000357475 IGDCC4Q8TDY8 1250 aa29.9■■■□□ 2.38
SSBP3-202ENST00000357475 CNKSR2Q8WXI2 1034 aa29.9■■■□□ 2.38
SSBP3-202ENST00000357475 CABP5Q9NP86 173 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms