RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 ZNF654Q8IZM8 581 aa20.25■□□□□ 0.83
GYPC-202ENST00000356887 PCDHB6Q9Y5E3 794 aa20.25■□□□□ 0.83
GYPC-202ENST00000356887 SRPRBQ9Y5M8 271 aaKnown RBP20.25■□□□□ 0.83
GYPC-202ENST00000356887 DOT1LQ8TEK3 1739 aa20.25■□□□□ 0.83
GYPC-202ENST00000356887 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
GYPC-202ENST00000356887 POLR2DO15514 142 aaKnown RBP20.25■□□□□ 0.83
GYPC-202ENST00000356887 PRR29P0C7W0 189 aa20.25■□□□□ 0.83
GYPC-202ENST00000356887 PPARAQ07869 468 aa20.25■□□□□ 0.83
GYPC-202ENST00000356887 FAM98CQ17RN3 349 aaKnown RBP20.25■□□□□ 0.83
GYPC-202ENST00000356887 CMTR1Q8N1G2 835 aaKnown RBP20.25■□□□□ 0.83
GYPC-202ENST00000356887 CCDC82Q8N4S0 544 aa20.25■□□□□ 0.83
GYPC-202ENST00000356887 MIGA1Q8NAN2 632 aa20.25■□□□□ 0.83
GYPC-202ENST00000356887 IGHMBP2P38935 993 aaKnown RBP20.24■□□□□ 0.83
GYPC-202ENST00000356887 TBX2Q13207 712 aaPredicted RBP20.24■□□□□ 0.83
GYPC-202ENST00000356887 NR5A1Q13285 461 aa20.24■□□□□ 0.83
GYPC-202ENST00000356887 MORC3Q14149 939 aa20.24■□□□□ 0.83
GYPC-202ENST00000356887 FBXO38Q6PIJ6 1188 aa20.24■□□□□ 0.83
GYPC-202ENST00000356887 FCHSD1Q86WN1 690 aa20.24■□□□□ 0.83
GYPC-202ENST00000356887 REXO1L1PQ8IX06 675 aa20.24■□□□□ 0.83
GYPC-202ENST00000356887 MLKLQ8NB16 471 aa20.24■□□□□ 0.83
GYPC-202ENST00000356887 LRP2BPQ9P2M1 347 aa20.24■□□□□ 0.83
GYPC-202ENST00000356887 ZNF18P17022 549 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 PARP10Q53GL7 1025 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 TRIM65Q6PJ69 517 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 TMEM139Q8IV31 216 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 ENOX1Q8TC92 643 aaKnown RBP20.23■□□□□ 0.83
GYPC-202ENST00000356887 OXER1Q8TDS5 423 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 NOL10Q9BSC4 688 aaKnown RBP20.23■□□□□ 0.83
GYPC-202ENST00000356887 CCDC87Q9NVE4 849 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 ANAPC4Q9UJX5 808 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 AFF2P51816 1311 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 PHLPP2Q6ZVD8 1323 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 SEC23AQ15436 765 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 HOMER1Q86YM7 354 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 NUP133Q8WUM0 1156 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 CEP131Q9UPN4 1083 aa20.23■□□□□ 0.83
GYPC-202ENST00000356887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.23■□□□□ 0.832e-7■■□□□ 11.8
GYPC-202ENST00000356887 ACTN4O43707 911 aaKnown RBP20.22■□□□□ 0.83
GYPC-202ENST00000356887 CAMTA2O94983 1202 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 CYP7A1P22680 504 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 FMR1Q06787 632 aaKnown RBP eCLIP20.22■□□□□ 0.83
GYPC-202ENST00000356887 CHRNDQ07001 517 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 GOLGA8FQ08AF8 430 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 GOLGA8DPQ0D2H9 430 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 SMARCE1Q969G3 411 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 UBAC1Q9BSL1 405 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 FAM53CQ9NYF3 392 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 DACH1Q9UI36 760 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 KANK3Q6NY19 840 aa20.22■□□□□ 0.83
GYPC-202ENST00000356887 KIF20AO95235 890 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 NTSR2O95665 410 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 PTPN21Q16825 1174 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 ADGRA1Q86SQ6 560 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 LRRN4CLQ8ND94 238 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 SPATA20Q8TB22 786 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
GYPC-202ENST00000356887 CABP5Q9NP86 173 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 DNAI1Q9UI46 699 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 NFE2L3Q9Y4A8 694 aa20.21■□□□□ 0.83
GYPC-202ENST00000356887 ARHGAP6O43182 974 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 CRKLP46109 303 aaKnown RBP20.2■□□□□ 0.82
GYPC-202ENST00000356887 GRAMD1CQ8IYS0 662 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 ESR2Q92731 530 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 SHISA4Q96DD7 197 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 MED15Q96RN5 788 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 CSRNP2Q9H175 543 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 TNKSO95271 1327 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 MINDY4BA8MYZ0 360 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 ZSCAN12O43309 604 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 ERCC6LQ2NKX8 1250 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 USP49Q70CQ1 688 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 MARCH10Q8NA82 808 aaPredicted RBP20.2■□□□□ 0.82
GYPC-202ENST00000356887 SDR42E1Q8WUS8 393 aa20.2■□□□□ 0.82
GYPC-202ENST00000356887 MAGEB6P1A0A0J9YX57 407 aa20.19■□□□□ 0.82
GYPC-202ENST00000356887 H2AFXP16104 143 aaPredicted RBP20.19■□□□□ 0.82
GYPC-202ENST00000356887 THSD7AQ9UPZ6 1657 aa20.19■□□□□ 0.82
GYPC-202ENST00000356887 ZNF804BA4D1E1 1349 aa20.19■□□□□ 0.82
GYPC-202ENST00000356887 ATP2B1P20020 1258 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 CDK11BP21127 795 aaKnown RBP20.18■□□□□ 0.82
GYPC-202ENST00000356887 FUT2Q10981 343 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 PKN1Q16512 942 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 ZNF827Q17R98 1081 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 HSP90AA4PQ58FG1 418 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 TAF3Q5VWG9 929 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 AATFQ9NY61 560 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■■□□ 17.3
GYPC-202ENST00000356887 FANCGO15287 622 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 PLCD1P51178 756 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 PDILTQ8N807 584 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 BAG1Q99933 345 aaPredicted RBP20.18■□□□□ 0.82
GYPC-202ENST00000356887 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
GYPC-202ENST00000356887 NIP7Q9Y221 180 aaKnown RBP eCLIP20.18■□□□□ 0.82
GYPC-202ENST00000356887 PPP2R2CQ9Y2T4 447 aa20.18■□□□□ 0.82
GYPC-202ENST00000356887 MYH6P13533 1939 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 VWA3AA6NCI4 1184 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 TRIM75PA6NK02 468 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 SMIM22K7EJ46 135 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 NPHP1O15259 732 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 ERCC5P28715 1186 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms