RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 USP17L21D6R901 530 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 HARSP12081 509 aaKnown RBP17.91■□□□□ 0.46
PTPN11-201ENST00000351677 PSMD1Q99460 953 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 RGS12O14924 1447 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 CABP7Q86V35 215 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 KIAA1468Q9P260 1216 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 FGAP02671 866 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 GYG1P46976 350 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 BCAMP50895 628 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 CALCRLQ16602 461 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 USH1GQ495M9 461 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 CCDC114Q96M63 670 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 ARHGAP6O43182 974 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 TSNARE1Q96NA8 513 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.9■□□□□ 0.46
PTPN11-201ENST00000351677 ZFYVE16Q7Z3T8 1539 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 PDE6AP16499 860 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 ADKP55263 362 aaKnown RBP17.9■□□□□ 0.46
PTPN11-201ENST00000351677 STMN4Q9H169 189 aaPredicted RBP17.9■□□□□ 0.46
PTPN11-201ENST00000351677 SLC1A4P43007 532 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 ASIC2Q16515 512 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 HERC4Q5GLZ8 1057 aaPredicted RBP17.9■□□□□ 0.46
PTPN11-201ENST00000351677 UTP14CQ5TAP6 766 aaKnown RBP17.9■□□□□ 0.46
PTPN11-201ENST00000351677 GAS2L3Q86XJ1 694 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 SLF1Q9BQI6 1058 aa17.9■□□□□ 0.46
PTPN11-201ENST00000351677 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.46
PTPN11-201ENST00000351677 CCDC169A6NNP5 214 aa17.89■□□□□ 0.46
PTPN11-201ENST00000351677 NELFCDQ8IXH7 590 aa17.89■□□□□ 0.46
PTPN11-201ENST00000351677 FAM76AQ8TAV0 307 aa17.89■□□□□ 0.46
PTPN11-201ENST00000351677 CETN3O15182 167 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 TUBBP07437 444 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 ZBTB38Q8NAP3 1195 aaPredicted RBP17.89■□□□□ 0.45
PTPN11-201ENST00000351677 SLAIN2Q9P270 581 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 ADCY9O60503 1353 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 DDX39AO00148 427 aaKnown RBP17.89■□□□□ 0.45
PTPN11-201ENST00000351677 ATP2A1O14983 1001 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 TNFAIP3P21580 790 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 MICALL1Q8N3F8 863 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 PSMB7Q99436 277 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 AATKQ6ZMQ8 1374 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 GPATCH11Q8N954 259 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 EBAG9O00559 213 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 BIRC3Q13489 604 aa17.89■□□□□ 0.45
PTPN11-201ENST00000351677 PUS3Q9BZE2 481 aaKnown RBP17.89■□□□□ 0.45
PTPN11-201ENST00000351677 DPP8Q6V1X1 898 aaPredicted RBP17.88■□□□□ 0.45
PTPN11-201ENST00000351677 TMTC1Q8IUR5 882 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 FBF1Q8TES7 1133 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 MTRF1LQ9UGC7 380 aaKnown RBP17.88■□□□□ 0.45
PTPN11-201ENST00000351677 SCRN1Q12765 414 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 NOSTRINQ8IVI9 506 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 ARHGEF10LQ9HCE6 1279 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 CALUO43852 315 aaPredicted RBP17.88■□□□□ 0.45
PTPN11-201ENST00000351677 SECISBP2LQ93073 1101 aaKnown RBP17.88■□□□□ 0.45
PTPN11-201ENST00000351677 SERPINA10Q9UK55 444 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 VWA3BQ502W6 1294 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 SEL1L2Q5TEA6 688 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 C8orf74Q6P047 294 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 CPLX4Q7Z7G2 160 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 SH2D4AQ9H788 454 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 BIN2Q9UBW5 565 aaPredicted RBP17.88■□□□□ 0.45
PTPN11-201ENST00000351677 DBNLQ9UJU6 430 aaKnown RBP17.88■□□□□ 0.45
PTPN11-201ENST00000351677 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 ADORA1P30542 326 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 TTC16Q8NEE8 873 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 NUP58Q9BVL2 599 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 KCNK9Q9NPC2 374 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 MTUS1Q9ULD2 1270 aa17.88■□□□□ 0.45
PTPN11-201ENST00000351677 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTPN11-201ENST00000351677 ZSCAN10Q96SZ4 725 aaPredicted RBP17.87■□□□□ 0.45
PTPN11-201ENST00000351677 ZMYM6O95789 1325 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 NEO1Q92859 1461 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 RPS8P62241 208 aaKnown RBP17.87■□□□□ 0.45
PTPN11-201ENST00000351677 LRMPQ12912 555 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 CCDC121Q6ZUS5 278 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 ZNF354CQ86Y25 554 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 ANKS4BQ8N8V4 417 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 TSC1Q92574 1164 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 CEP83Q9Y592 693 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 CLIC6Q96NY7 704 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 FNBP1Q96RU3 617 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 TTC37Q6PGP7 1564 aa17.87■□□□□ 0.45
PTPN11-201ENST00000351677 SPOPO43791 374 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 CALCOCO2Q13137 446 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 CLIC4Q9Y696 253 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 PDIA3P30101 505 aaKnown RBP17.86■□□□□ 0.45
PTPN11-201ENST00000351677 C6orf163Q5TEZ5 329 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 GREM2Q9H772 168 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 PCDHA7Q9UN72 937 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 ZNF827Q17R98 1081 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 OTUD6BQ8N6M0 293 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 ARHGEF35A5YM69 484 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 MSL1Q68DK7 614 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 CCDC26Q8TAB7 109 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 NOX5Q96PH1 765 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 LZTS2Q9BRK4 669 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 SMCO2A6NFE2 343 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms