RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 SLC30A9Q6PML9 568 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.03
LIN28B-201ENST00000345080 PHAXQ9H814 394 aaKnown RBP8.59□□□□□ -1.03
LIN28B-201ENST00000345080 GDPD2Q9HCC8 539 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 PLCB1Q9NQ66 1216 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 STK38LQ9Y2H1 464 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 CSADQ9Y600 493 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 CROCC2H7BZ55 1655 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 SGSM2O43147 1006 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 ZNF76P36508 570 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 CCT5P48643 541 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 MUM1Q2TAK8 710 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 GDAP1L1Q96MZ0 367 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.59□□□□□ -1.03
LIN28B-201ENST00000345080 GPHNQ9NQX3 736 aaPredicted RBP8.59□□□□□ -1.03
LIN28B-201ENST00000345080 TRPM1Q7Z4N2 1603 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 CCDC63Q8NA47 563 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 CACTINQ8WUQ7 758 aaKnown RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 ARHGEF2Q92974 986 aaKnown RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 LRRC45Q96CN5 670 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 CCDC51Q96ER9 411 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 SPAG5Q96R06 1193 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 CARD10Q9BWT7 1032 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 MOV10L1Q9BXT6 1211 aaKnown RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 YIPF3Q9GZM5 350 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 PDE11AQ9HCR9 933 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 MYO1AQ9UBC5 1043 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 PDE1AP54750 535 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 IQUBQ8NA54 791 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 MTIF3Q9H2K0 278 aaKnown RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 HPDP32754 393 aaPredicted RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 IRX4P78413 519 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 SPZ1Q9BXG8 430 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 TFIP11Q9UBB9 837 aaKnown RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 TSPY2A6NKD2 308 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 TSPY3P0CV98 308 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 TSPY8P0CW00 308 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 TSPY1Q01534 308 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 CUL3Q13618 768 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 ZBTB41Q5SVQ8 909 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 SRGAP1Q7Z6B7 1085 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 IFT20Q8IY31 132 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 RUBCNQ92622 972 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 NUP88Q99567 741 aaPredicted RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 SCOCQ9UIL1 159 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 KCNJ6P48051 423 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 CCDC144CPQ8IYA2 1237 aa8.58□□□□□ -1.04
LIN28B-201ENST00000345080 PUF60Q9UHX1 559 aaKnown RBP8.58□□□□□ -1.04
LIN28B-201ENST00000345080 TLDC2A0PJX2 215 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 ALDH3A1P30838 453 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 SLC8A3P57103 927 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 FKBP15Q5T1M5 1219 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 FERMT2Q96AC1 680 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 AS3MTQ9HBK9 375 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 MBIPQ9NS73 344 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 FAN1Q9Y2M0 1017 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 ARIH1Q9Y4X5 557 aaPredicted RBP8.57□□□□□ -1.04
LIN28B-201ENST00000345080 RASSF10A6NK89 507 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 PRPF4BQ13523 1007 aaKnown RBP8.57□□□□□ -1.04
LIN28B-201ENST00000345080 ANKRD27Q96NW4 1050 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 MIS12Q9H081 205 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 MRGBPQ9NV56 204 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 TSKSQ9UJT2 592 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 WBP4O75554 376 aaKnown RBP8.57□□□□□ -1.04
LIN28B-201ENST00000345080 FGFR1OPO95684 399 aaKnown RBP8.57□□□□□ -1.04
LIN28B-201ENST00000345080 TNNC1P63316 161 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 PAK2Q13177 524 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 ZNF569Q5MCW4 686 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 BICD1Q96G01 975 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 RMI1Q9H9A7 625 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 ECHDC1Q9NTX5 307 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 FAM169AQ9Y6X4 670 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 ACBD5Q5T8D3 534 aaPredicted RBP8.57□□□□□ -1.04
LIN28B-201ENST00000345080 PHLDB3Q6NSJ2 640 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 EGFL6Q8IUX8 553 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 HAUS1Q96CS2 278 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 PPP1R13BQ96KQ4 1090 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 IWS1Q96ST2 819 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.57□□□□□ -1.04
LIN28B-201ENST00000345080 CTTNBP2NLQ9P2B4 639 aa8.57□□□□□ -1.04
LIN28B-201ENST00000345080 FAM135BQ49AJ0 1406 aa8.56□□□□□ -1.04
LIN28B-201ENST00000345080 ZBTB7BO15156 539 aaPredicted RBP8.56□□□□□ -1.04
LIN28B-201ENST00000345080 RNF40O75150 1001 aa8.56□□□□□ -1.04
LIN28B-201ENST00000345080 ATP8B2P98198 1209 aa8.56□□□□□ -1.04
LIN28B-201ENST00000345080 SFSWAPQ12872 951 aaKnown RBP8.56□□□□□ -1.04
LIN28B-201ENST00000345080 INTS8Q75QN2 995 aaKnown RBP8.56□□□□□ -1.04
LIN28B-201ENST00000345080 FNBP4Q8N3X1 1017 aaPredicted RBP8.56□□□□□ -1.04
LIN28B-201ENST00000345080 ATP2A3Q93084 1043 aa8.56□□□□□ -1.04
LIN28B-201ENST00000345080 THUMPD2Q9BTF0 503 aaKnown RBP8.56□□□□□ -1.04
LIN28B-201ENST00000345080 NUF2Q9BZD4 464 aa8.56□□□□□ -1.04
LIN28B-201ENST00000345080 UBA5Q9GZZ9 404 aa8.56□□□□□ -1.04
LIN28B-201ENST00000345080 DDX21Q9NR30 783 aaKnown RBP eCLIP8.56□□□□□ -1.04
LIN28B-201ENST00000345080 RASAL2Q9UJF2 1139 aa8.56□□□□□ -1.04
LIN28B-201ENST00000345080 IQGAP3Q86VI3 1631 aa8.56□□□□□ -1.04
LIN28B-201ENST00000345080 LMNAP02545 664 aaKnown RBP8.56□□□□□ -1.04
LIN28B-201ENST00000345080 CC2D1AQ6P1N0 951 aaPredicted RBP8.56□□□□□ -1.04
LIN28B-201ENST00000345080 FERMT3Q86UX7 667 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms