RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 PTPDC1A2A3K4 754 aa11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 SLU7O95391 586 aaKnown RBP11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 IMMTQ16891 758 aaKnown RBP11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 NOM1Q5C9Z4 860 aaKnown RBP11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZNF804AQ7Z570 1209 aa11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 DZIP1Q86YF9 867 aaKnown RBP11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 KCNB2Q92953 911 aa11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 AKT1S1Q96B36 256 aa11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 TIGD1Q96MW7 591 aa11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 TPCN1Q9ULQ1 816 aa11.96□□□□□ -0.5
CAPRIN1-201ENST00000341394 RPAP1Q9BWH6 1393 aaPredicted RBP11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 SMIM22K7EJ46 135 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 GPAA1O43292 621 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 HSPD1P10809 573 aaKnown RBP11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 PDE6AP16499 860 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 BRIP1Q9BX63 1249 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZC3H12CQ9C0D7 883 aaKnown RBP11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 DEF6Q9H4E7 631 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 XDHP47989 1333 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 ALDH1B1P30837 517 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 KRT32Q14532 448 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 ADGRA1Q86SQ6 560 aa11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 NUP88Q99567 741 aaPredicted RBP11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 NAA16Q6N069 864 aaPredicted RBP11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 TRMT44Q8IYL2 757 aaKnown RBP11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 FAM84BQ96KN1 310 aaPredicted RBP11.95□□□□□ -0.5
CAPRIN1-201ENST00000341394 MBD4O95243 580 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 SYKP43405 635 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 GYS2P54840 703 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 SETQ01105 290 aaPredicted RBP11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 JMYQ8N9B5 988 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZNF384Q8TF68 577 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 LEO1Q8WVC0 666 aaPredicted RBP11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 NACAP1Q9BZK3 213 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 GJB4Q9NTQ9 266 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 PNPLA7Q6ZV29 1317 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZNF213O14771 459 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 HS1BP3Q53T59 392 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 KIAA1328Q86T90 577 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 SMAP1Q8IYB5 467 aaPredicted RBP11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 CMTR1Q8N1G2 835 aaKnown RBP11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 NAPBQ9H115 298 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 EPC1Q9H2F5 836 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 ARMT1Q9H993 441 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 DESI2Q9BSY9 194 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 VPS18Q9P253 973 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 CHD4Q14839 1912 aa11.94□□□□□ -0.5
CAPRIN1-201ENST00000341394 TCRBV5S4A2TA0A5A2 114 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 IFIT3O14879 490 aaKnown RBP11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 BMS1Q14692 1282 aaKnown RBP11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 DPP8Q6V1X1 898 aaPredicted RBP11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 PSMB7Q99436 277 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZNF75DP51815 510 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 TAX1BP1Q86VP1 789 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 ATF5Q9Y2D1 282 aaPredicted RBP11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 COL11A2P13942 1736 aaPredicted RBP11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 BAZ2AQ9UIF9 1905 aaKnown RBP11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 RFX7Q2KHR2 1363 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 SMTNL1A8MU46 457 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 NPR1P16066 1061 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 ADD2P35612 726 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 GPSM2P81274 684 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 CACTINQ8WUQ7 758 aaKnown RBP11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 INCENPQ9NQS7 918 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 ST7Q9NRC1 585 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 SLC4A4Q9Y6R1 1079 aa11.93□□□□□ -0.5
CAPRIN1-201ENST00000341394 ATP2B4P23634 1241 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 BCCIPQ9P287 314 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 MTMR6Q9Y217 621 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 PAXBP1Q9Y5B6 917 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 CCDC181Q5TID7 509 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 MRPS27Q92552 414 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 NBPF3Q9H094 633 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 CAPN2P17655 700 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 CHRNA5P30532 468 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 TOB2Q14106 344 aaPredicted RBP11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 PHKBQ93100 1093 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 IRS2Q9Y4H2 1338 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 SEC31AO94979 1220 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 EVX2Q03828 476 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 UBE3CQ15386 1083 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 ODF2Q5BJF6 829 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 SPTY2D1Q68D10 685 aaPredicted RBP11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 MASTLQ96GX5 879 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 INTS4Q96HW7 963 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 CALCOCO1Q9P1Z2 691 aa11.92□□□□□ -0.5
CAPRIN1-201ENST00000341394 TACC3Q9Y6A5 838 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms