RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 NAIF1Q69YI7 327 aaPredicted RBP17.97■□□□□ 0.47
NPHP3-201ENST00000337331 XAGE2Q96GT9 111 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 LUC7L2Q9Y383 392 aaKnown RBP17.97■□□□□ 0.47
NPHP3-201ENST00000337331 ATP1A3P13637 1013 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 PTH1RQ03431 593 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 EAF2Q96CJ1 260 aaPredicted RBP17.96■□□□□ 0.47
NPHP3-201ENST00000337331 FUCA2Q9BTY2 467 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 FANCLQ9NW38 375 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.96■□□□□ 0.47
NPHP3-201ENST00000337331 JAG2Q9Y219 1238 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 MYO5CQ9NQX4 1742 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 KCNQ3O43525 872 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 KRT83P78385 493 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 ZNF174Q15697 407 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 ARMCX5Q6P1M9 558 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 DIS3L2Q8IYB7 885 aaKnown RBP17.96■□□□□ 0.47
NPHP3-201ENST00000337331 RTL9Q8NET4 1388 aa17.96■□□□□ 0.47
NPHP3-201ENST00000337331 H3BQF6 201 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 PPP1R12AO14974 1030 aaPredicted RBP17.95■□□□□ 0.46
NPHP3-201ENST00000337331 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
NPHP3-201ENST00000337331 WDR24Q96S15 920 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 ATP7AQ04656 1500 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 SASH3O75995 380 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 TUBB2AQ13885 445 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 DTHD1Q6ZMT9 781 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 TUBB2BQ9BVA1 445 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 FUT8Q9BYC5 575 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 SAMD9LQ8IVG5 1584 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 ITGA6P23229 1130 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 DDB1Q16531 1140 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 SPECC1LQ69YQ0 1117 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 TMEM87BQ96K49 555 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 TAOK3Q9H2K8 898 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 NFE2L3Q9Y4A8 694 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 KIF24Q5T7B8 1368 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 GCC2Q8IWJ2 1684 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 CCT6AP40227 531 aaKnown RBP17.95■□□□□ 0.46
NPHP3-201ENST00000337331 STXBP4Q6ZWJ1 553 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 PGBD1Q96JS3 809 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 C6orf50Q9HD87 102 aa17.95■□□□□ 0.46
NPHP3-201ENST00000337331 CCDC122Q5T0U0 273 aa17.94■□□□□ 0.46
NPHP3-201ENST00000337331 ARMC2Q8NEN0 867 aa17.94■□□□□ 0.46
NPHP3-201ENST00000337331 MYL10Q9BUA6 226 aa17.94■□□□□ 0.46
NPHP3-201ENST00000337331 VAV2P52735 878 aa17.94■□□□□ 0.46
NPHP3-201ENST00000337331 KRT79Q5XKE5 535 aa17.94■□□□□ 0.46
NPHP3-201ENST00000337331 ERMNQ8TAM6 284 aa17.94■□□□□ 0.46
NPHP3-201ENST00000337331 PHKBQ93100 1093 aa17.94■□□□□ 0.46
NPHP3-201ENST00000337331 PRDM1O75626 825 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 TNNI2P48788 182 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 PICALMQ13492 652 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 PPP1R7Q15435 360 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 CNGA4Q8IV77 575 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
NPHP3-201ENST00000337331 SLC35F6Q8N357 371 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 SLF1Q9BQI6 1058 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 OSBPL5Q9H0X9 879 aaPredicted RBP17.93■□□□□ 0.46
NPHP3-201ENST00000337331 POLR2DO15514 142 aaKnown RBP17.93■□□□□ 0.46
NPHP3-201ENST00000337331 ERCC3P19447 782 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 A0A0D9SFI3 127 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 GCOM1H8Y6P7 765 aaPredicted RBP17.93■□□□□ 0.46
NPHP3-201ENST00000337331 MYZAPP0CAP1 466 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 DESP17661 470 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 LRRC31Q6UY01 552 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 ARFGAP2Q8N6H7 521 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
NPHP3-201ENST00000337331 IFI16Q16666 785 aaKnown RBP17.93■□□□□ 0.46
NPHP3-201ENST00000337331 SPDL1Q96EA4 605 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 ARMT1Q9H993 441 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 SLC52A2Q9HAB3 445 aa17.93■□□□□ 0.46
NPHP3-201ENST00000337331 ATP5JP18859 108 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 KIAA0753Q2KHM9 967 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 VPS16Q9H269 839 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 TTF2Q9UNY4 1162 aaKnown RBP17.92■□□□□ 0.46
NPHP3-201ENST00000337331 MAPK8IP1Q9UQF2 711 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 A6NNZ2 444 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 STX10O60499 249 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 SLC8A1P32418 973 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 IQCB1Q15051 598 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 TUBB8Q3ZCM7 444 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 EHMT1Q9H9B1 1298 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 V9GY48 417 aaPredicted RBP17.92■□□□□ 0.46
NPHP3-201ENST00000337331 CLTAP09496 248 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 WHAMMP3Q1A5X7 153 aa17.92■□□□□ 0.46
NPHP3-201ENST00000337331 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
NPHP3-201ENST00000337331 NDUFA8P51970 172 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 KRT40Q6A162 431 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 SAAL1Q96ER3 474 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 ENO4A6NNW6 628 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 DEXIO95424 95 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
NPHP3-201ENST00000337331 KIRREL3Q8IZU9 778 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 IRX2Q9BZI1 471 aaPredicted RBP17.91■□□□□ 0.46
NPHP3-201ENST00000337331 OSBPL3Q9H4L5 887 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 ZSWIM6Q9HCJ5 1215 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 CD248Q9HCU0 757 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 SH3TC1Q8TE82 1336 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 RIN2Q8WYP3 895 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms