RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 NTRK3Q16288 839 aa18.47■□□□□ 0.55
UPK3B-202ENST00000334348 APOA5Q6Q788 366 aa18.47■□□□□ 0.55
UPK3B-202ENST00000334348 PUS7LQ9H0K6 701 aaKnown RBP18.47■□□□□ 0.55
UPK3B-202ENST00000334348 FBXO2Q9UK22 296 aaPredicted RBP18.47■□□□□ 0.55
UPK3B-202ENST00000334348 AFDNP55196 1824 aaKnown RBP18.46■□□□□ 0.55
UPK3B-202ENST00000334348 PHACTR2O75167 634 aa18.46■□□□□ 0.55
UPK3B-202ENST00000334348 SPATA1Q5VX52 437 aa18.46■□□□□ 0.55
UPK3B-202ENST00000334348 CNGA4Q8IV77 575 aa18.46■□□□□ 0.55
UPK3B-202ENST00000334348 NOSTRINQ8IVI9 506 aa18.46■□□□□ 0.55
UPK3B-202ENST00000334348 ZNF579Q8NAF0 562 aaKnown RBP18.46■□□□□ 0.55
UPK3B-202ENST00000334348 CPLX3Q8WVH0 158 aa18.46■□□□□ 0.55
UPK3B-202ENST00000334348 GEMIN8Q9NWZ8 242 aaKnown RBP18.46■□□□□ 0.55
UPK3B-202ENST00000334348 ADD3Q9UEY8 706 aaKnown RBP18.46■□□□□ 0.55
UPK3B-202ENST00000334348 GUCY2CP25092 1073 aa18.46■□□□□ 0.55
UPK3B-202ENST00000334348 CTCFLQ8NI51 663 aaPredicted RBP18.46■□□□□ 0.55
UPK3B-202ENST00000334348 CTAGE1Q96RT6 745 aa18.46■□□□□ 0.55
UPK3B-202ENST00000334348 CDC5LQ99459 802 aaKnown RBP18.46■□□□□ 0.55
UPK3B-202ENST00000334348 LRP6O75581 1613 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 CPP00450 1065 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 TFRCP02786 760 aaKnown RBP18.45■□□□□ 0.54
UPK3B-202ENST00000334348 RXRAP19793 462 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 GRIN1Q05586 938 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 CYB5R4Q7L1T6 521 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 NBPF3Q9H094 633 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 UBN2Q6ZU65 1347 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 ACTN4O43707 911 aaKnown RBP18.45■□□□□ 0.54
UPK3B-202ENST00000334348 RANBP6O60518 1105 aaKnown RBP18.45■□□□□ 0.54
UPK3B-202ENST00000334348 TMTC1Q8IUR5 882 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 EFCAB13Q8IY85 973 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 GRAMD1CQ8IYS0 662 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 NOA1Q8NC60 698 aaKnown RBP18.45■□□□□ 0.54
UPK3B-202ENST00000334348 ZBTB9Q96C00 473 aa18.45■□□□□ 0.54
UPK3B-202ENST00000334348 ABCA3Q99758 1704 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 SEMA3EO15041 775 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 GPAA1O43292 621 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 RNF40O75150 1001 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 CASP14P31944 242 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 TOB1P50616 345 aaPredicted RBP18.44■□□□□ 0.54
UPK3B-202ENST00000334348 AMPD2Q01433 879 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 AFAP1L1Q8TED9 768 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 MYO6Q9UM54 1294 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 KDM6AO15550 1401 aaPredicted RBP18.44■□□□□ 0.54
UPK3B-202ENST00000334348 ITIH6Q6UXX5 1313 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 STK36Q9NRP7 1315 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 ZBTB43O43298 467 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 SYF2O95926 243 aaKnown RBP18.44■□□□□ 0.54
UPK3B-202ENST00000334348 FILIP1LQ4L180 1135 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 CDKAL1Q5VV42 579 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 ACRBPQ8NEB7 543 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 ZNF594Q96JF6 807 aaPredicted RBP18.44■□□□□ 0.54
UPK3B-202ENST00000334348 PRDM11Q9NQV5 511 aa18.44■□□□□ 0.54
UPK3B-202ENST00000334348 FAM217BQ9NTX9 383 aaPredicted RBP18.44■□□□□ 0.54
UPK3B-202ENST00000334348 CAMTA1Q9Y6Y1 1673 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 PRPF6O94906 941 aaKnown RBP18.43■□□□□ 0.54
UPK3B-202ENST00000334348 GYPCP04921 128 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 ARHGAP25P42331 645 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 CCDC148Q8NFR7 591 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 TMEM87BQ96K49 555 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 SEC31BQ9NQW1 1179 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 CEP126Q9P2H0 1117 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 DENND2AQ9ULE3 1009 aa18.43■□□□□ 0.54
UPK3B-202ENST00000334348 DNAJC21Q5F1R6 531 aaKnown RBP18.42■□□□□ 0.54
UPK3B-202ENST00000334348 C8orf37Q96NL8 207 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 COL22A1Q8NFW1 1626 aaPredicted RBP18.42■□□□□ 0.54
UPK3B-202ENST00000334348 ARFGEF2Q9Y6D5 1785 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 GOLGA8AA7E2F4 631 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 ABL1P00519 1130 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 ATP2B1P20020 1258 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 MCM3P25205 808 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.54
UPK3B-202ENST00000334348 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
UPK3B-202ENST00000334348 CUL4BQ13620 913 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 HSP90AB3PQ58FF7 597 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 RILPL1Q5EBL4 403 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 TBC1D10CQ8IV04 446 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 SENP2Q9HC62 589 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 SRPRBQ9Y5M8 271 aaKnown RBP18.42■□□□□ 0.54
UPK3B-202ENST00000334348 EP400Q96L91 3159 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 SYNRGQ9UMZ2 1314 aa18.42■□□□□ 0.54
UPK3B-202ENST00000334348 BTBD18B2RXH4 712 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 MMP1P03956 469 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 SAFBQ15424 915 aaKnown RBP eCLIP18.41■□□□□ 0.54
UPK3B-202ENST00000334348 IGDCC4Q8TDY8 1250 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 WASF1Q92558 559 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 PUS3Q9BZE2 481 aaKnown RBP18.41■□□□□ 0.54
UPK3B-202ENST00000334348 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
UPK3B-202ENST00000334348 USP14P54578 494 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 ERVK-24P63145 666 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 MAP9Q49MG5 647 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 SGMS1Q86VZ5 419 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 SUGP1Q8IWZ8 645 aaKnown RBP18.41■□□□□ 0.54
UPK3B-202ENST00000334348 XAGE2Q96GT9 111 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
UPK3B-202ENST00000334348 ABCC12Q96J65 1359 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms