RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PLCD1P51178 756 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 PICALMQ13492 652 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 RASA3Q14644 834 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 STOX1Q6ZVD7 989 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 LDHDQ86WU2 507 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 DGKHQ86XP1 1220 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 SULF1Q8IWU6 871 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 MAP3K14Q99558 947 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 PDRG1Q9NUG6 133 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 NUCB2P80303 420 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 PDE4CQ08493 712 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 ANGEL2Q5VTE6 544 aaKnown RBP11.14□□□□□ -0.63
C11orf54-201ENST00000331239 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 SH3BP5LQ7L8J4 393 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 SGMS1Q86VZ5 419 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 CSRNP1Q96S65 589 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 PANK2Q9BZ23 570 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 SH2B1Q9NRF2 756 aaPredicted RBP11.14□□□□□ -0.63
C11orf54-201ENST00000331239 ZNF112Q9UJU3 913 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 PCDHAC2Q9Y5I4 1007 aa11.14□□□□□ -0.63
C11orf54-201ENST00000331239 ERICH2A1L162 156 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 DDTLA6NHG4 134 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-201ENST00000331239 TCP10L2B9ZVM9 353 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 NEK4P51957 841 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 HAND2P61296 217 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 CTDSPL2Q05D32 466 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
C11orf54-201ENST00000331239 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-201ENST00000331239 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-201ENST00000331239 GRPEL1Q9HAV7 217 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 SAP30BPQ9UHR5 308 aaKnown RBP11.13□□□□□ -0.63
C11orf54-201ENST00000331239 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 CLRN2A0PK11 232 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 BAG4O95429 457 aaKnown RBP11.13□□□□□ -0.63
C11orf54-201ENST00000331239 RASA1P20936 1047 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 FKBP1BP68106 108 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 ADCK5Q3MIX3 580 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 ZNF274Q96GC6 653 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-201ENST00000331239 ZNF341Q9BYN7 854 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 GGA3Q9NZ52 723 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 POLR2AP24928 1970 aaKnown RBP11.13□□□□□ -0.63
C11orf54-201ENST00000331239 NID2Q14112 1375 aa11.13□□□□□ -0.63
C11orf54-201ENST00000331239 SHMT1P34896 483 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 NF2P35240 595 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 TMEM179Q6ZVK1 233 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 UBAC1Q9BSL1 405 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 ANGEL1Q9UNK9 670 aaKnown RBP11.12□□□□□ -0.63
C11orf54-201ENST00000331239 LIMCH1Q9UPQ0 1083 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 NEDD4P46934 1319 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 IGKV6D-41A0A0C4DH26 115 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 PRC1O43663 620 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 CTNND1O60716 968 aaKnown RBP11.12□□□□□ -0.63
C11orf54-201ENST00000331239 EGFRP00533 1210 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 CALM1P0DP23 149 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 CALM2P0DP24 149 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 CALM3P0DP25 149 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 CYP2D6P10635 497 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 TCP10Q12799 353 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 ZFPM1Q8IX07 1006 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 IGDCC4Q8TDY8 1250 aa11.12□□□□□ -0.63
C11orf54-201ENST00000331239 ZSCAN10Q96SZ4 725 aaPredicted RBP11.12□□□□□ -0.63
C11orf54-201ENST00000331239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.12□□□□□ -0.63
C11orf54-201ENST00000331239 CWC22Q9HCG8 908 aaKnown RBP11.12□□□□□ -0.63
C11orf54-201ENST00000331239 KDM4AO75164 1064 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 TSPY3P0CV98 308 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 TSPY8P0CW00 308 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-201ENST00000331239 NOL9Q5SY16 702 aaKnown RBP11.11□□□□□ -0.63
C11orf54-201ENST00000331239 RCSD1Q6JBY9 416 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 PIAS4Q8N2W9 510 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-201ENST00000331239 MKL1Q969V6 931 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 KANSL2Q9H9L4 492 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 CABP5Q9NP86 173 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 TSPY2A6NKD2 308 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 B4E1Z4 1266 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 SH2B2O14492 632 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-201ENST00000331239 RANBP6O60518 1105 aaKnown RBP11.11□□□□□ -0.63
C11orf54-201ENST00000331239 TMEM39BQ9GZU3 492 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 NYAP2Q9P242 653 aa11.11□□□□□ -0.63
C11orf54-201ENST00000331239 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 ASNSP08243 561 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 CACNB3P54284 484 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 ANTXR2P58335 489 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 TFAP4Q01664 338 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 SEC23AQ15436 765 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 KLHL40Q2TBA0 621 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 KRT26Q7Z3Y9 468 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 SH2D4AQ9H788 454 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 DHX16O60231 1041 aaKnown RBP11.1□□□□□ -0.63
C11orf54-201ENST00000331239 PPP1R12BO60237 982 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-201ENST00000331239 DDAH1O94760 285 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 WTAPQ15007 396 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 SYNE3Q6ZMZ3 975 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 INTS4Q96HW7 963 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms