RNA–Protein interactions for RNA: ENST00000322269.10

FAM3A-201, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-201ENST00000322269 USP40Q9NVE5 1235 aa21.71■■□□□ 1.07
FAM3A-201ENST00000322269 MCM9Q9NXL9 1143 aa21.71■■□□□ 1.07
FAM3A-201ENST00000322269 HDAC9Q9UKV0 1011 aa21.71■■□□□ 1.07
FAM3A-201ENST00000322269 HPS5Q9UPZ3 1129 aa21.71■■□□□ 1.07
FAM3A-201ENST00000322269 UTRNP46939 3433 aa21.71■■□□□ 1.07
FAM3A-201ENST00000322269 SH2B2O14492 632 aaPredicted RBP21.71■■□□□ 1.07
FAM3A-201ENST00000322269 OFD1O75665 1012 aa21.71■■□□□ 1.07
FAM3A-201ENST00000322269 YBX3P16989 372 aaKnown RBP eCLIP21.71■■□□□ 1.073e-6■■□□□ 11.7
FAM3A-201ENST00000322269 EIF6P56537 245 aaKnown RBP21.71■■□□□ 1.07
FAM3A-201ENST00000322269 RBM43Q6ZSC3 357 aaKnown RBP21.71■■□□□ 1.07
FAM3A-201ENST00000322269 OGFOD1Q8N543 542 aa21.71■■□□□ 1.07
FAM3A-201ENST00000322269 NAP1L2Q9ULW6 460 aaPredicted RBP21.71■■□□□ 1.07
FAM3A-201ENST00000322269 FOCADQ5VW36 1801 aa21.71■■□□□ 1.07
FAM3A-201ENST00000322269 NAV1Q8NEY1 1877 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 NEDD4P46934 1319 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 B4E1Z4 1266 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 KDM4AO75164 1064 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 CDC42EP5Q6NZY7 148 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 MFSD6Q6ZSS7 791 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 MAPKAPK5Q8IW41 473 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 IGDCC4Q8TDY8 1250 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 PGBD1Q96JS3 809 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 MTA3Q9BTC8 594 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 DACT1Q9NYF0 836 aa21.7■■□□□ 1.06
FAM3A-201ENST00000322269 LAMB1P07942 1786 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 FLT1P17948 1338 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 CYP2D7A0A087X1C5 515 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 USP17L8P0C7I0 530 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 ADD1P35611 737 aaKnown RBP21.69■■□□□ 1.06
FAM3A-201ENST00000322269 ATL3Q6DD88 541 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 CLSTN2Q9H4D0 955 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 RNF41Q9H4P4 317 aaPredicted RBP21.69■■□□□ 1.06
FAM3A-201ENST00000322269 PCDHAC2Q9Y5I4 1007 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 DICER1Q9UPY3 1922 aaKnown RBP21.69■■□□□ 1.06
FAM3A-201ENST00000322269 ECM29Q5VYK3 1845 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 PTMAP06454 111 aaKnown RBP21.69■■□□□ 1.06
FAM3A-201ENST00000322269 LIFRP42702 1097 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 CFAP100Q494V2 611 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.69■■□□□ 1.06
FAM3A-201ENST00000322269 SGMS1Q86VZ5 419 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 NKX2-3Q8TAU0 364 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 ZSWIM5Q9P217 1185 aa21.69■■□□□ 1.06
FAM3A-201ENST00000322269 SBF1O95248 1867 aa21.68■■□□□ 1.06
FAM3A-201ENST00000322269 GOLGA8BA8MQT2 603 aa21.68■■□□□ 1.06
FAM3A-201ENST00000322269 WDHD1O75717 1129 aaPredicted RBP21.68■■□□□ 1.06
FAM3A-201ENST00000322269 ADCY5O95622 1261 aa21.68■■□□□ 1.06
FAM3A-201ENST00000322269 AMOTL1Q8IY63 956 aa21.68■■□□□ 1.06
FAM3A-201ENST00000322269 TNMDQ9H2S6 317 aa21.68■■□□□ 1.06
FAM3A-201ENST00000322269 INCENPQ9NQS7 918 aa21.68■■□□□ 1.06
FAM3A-201ENST00000322269 TACC3Q9Y6A5 838 aa21.68■■□□□ 1.06
FAM3A-201ENST00000322269 RPS12P25398 132 aaKnown RBP21.67■■□□□ 1.06
FAM3A-201ENST00000322269 C12orf60Q5U649 245 aa21.67■■□□□ 1.06
FAM3A-201ENST00000322269 RGS22Q8NE09 1264 aa21.67■■□□□ 1.06
FAM3A-201ENST00000322269 SMIM22K7EJ46 135 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 STK11IPQ8N1F8 1099 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 BICD2Q8TD16 824 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 RCOR1Q9UKL0 485 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 DDX60LQ5H9U9 1706 aaKnown RBP21.66■■□□□ 1.06
FAM3A-201ENST00000322269 POLR3DP05423 398 aaPredicted RBP21.66■■□□□ 1.06
FAM3A-201ENST00000322269 SLC3A2P08195 630 aaKnown RBP21.66■■□□□ 1.06
FAM3A-201ENST00000322269 CYP2D6P10635 497 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 FDPSP14324 419 aaKnown RBP21.66■■□□□ 1.06
FAM3A-201ENST00000322269 MMP14P50281 582 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 TYRO3Q06418 890 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 PICALMQ13492 652 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 FAM200AQ8TCP9 573 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 PRMT6Q96LA8 375 aaPredicted RBP21.66■■□□□ 1.06
FAM3A-201ENST00000322269 LY9Q9HBG7 655 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 SAP30BPQ9UHR5 308 aaKnown RBP21.66■■□□□ 1.06
FAM3A-201ENST00000322269 MRVI1Q9Y6F6 885 aa21.66■■□□□ 1.06
FAM3A-201ENST00000322269 MYH1P12882 1939 aa21.65■■□□□ 1.06
FAM3A-201ENST00000322269 PCP11498 1178 aaKnown RBP21.65■■□□□ 1.06
FAM3A-201ENST00000322269 DLGAP5Q15398 846 aa21.65■■□□□ 1.06
FAM3A-201ENST00000322269 APOA5Q6Q788 366 aa21.65■■□□□ 1.06
FAM3A-201ENST00000322269 DDX4Q9NQI0 724 aaKnown RBP21.65■■□□□ 1.06
FAM3A-201ENST00000322269 SPDYE2BA6NHP3 402 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 FGRP09769 529 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 SPDYE6P0CI01 402 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 EVX2Q03828 476 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 CAMK4Q16566 473 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 SLC4A8Q2Y0W8 1093 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 TMEM67Q5HYA8 995 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 ZNF396Q96N95 335 aaPredicted RBP21.64■■□□□ 1.06
FAM3A-201ENST00000322269 TOMM22Q9NS69 142 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.06
FAM3A-201ENST00000322269 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.64■■□□□ 1.06
FAM3A-201ENST00000322269 CPLX1O14810 134 aa21.64■■□□□ 1.05
FAM3A-201ENST00000322269 IFIT3O14879 490 aaKnown RBP21.64■■□□□ 1.05
FAM3A-201ENST00000322269 NR1I2O75469 434 aa21.64■■□□□ 1.05
FAM3A-201ENST00000322269 RRP12Q5JTH9 1297 aaKnown RBP21.64■■□□□ 1.05
FAM3A-201ENST00000322269 MTMR14Q8NCE2 650 aa21.64■■□□□ 1.05
FAM3A-201ENST00000322269 DPF2Q92785 391 aa21.64■■□□□ 1.05
FAM3A-201ENST00000322269 IDI2Q9BXS1 227 aa21.64■■□□□ 1.05
FAM3A-201ENST00000322269 TDRD3Q9H7E2 651 aaKnown RBP21.64■■□□□ 1.05
FAM3A-201ENST00000322269 ZNF541Q9H0D2 1346 aa21.63■■□□□ 1.05
FAM3A-201ENST00000322269 ROBO3Q96MS0 1386 aa21.63■■□□□ 1.05
FAM3A-201ENST00000322269 PLCD1P51178 756 aa21.63■■□□□ 1.05
FAM3A-201ENST00000322269 NFIAQ12857 509 aa21.63■■□□□ 1.05
FAM3A-201ENST00000322269 SART3Q15020 963 aaKnown RBP21.63■■□□□ 1.05
FAM3A-201ENST00000322269 TMTC2Q8N394 836 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms