RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 TFAP4Q01664 338 aa20.75■□□□□ 0.91
RAB39A-201ENST00000320578 L1TD1Q5T7N2 865 aaKnown RBP20.75■□□□□ 0.91
RAB39A-201ENST00000320578 APOBEC3HQ6NTF7 200 aaKnown RBP20.75■□□□□ 0.91
RAB39A-201ENST00000320578 NBPF11Q86T75 865 aa20.75■□□□□ 0.91
RAB39A-201ENST00000320578 TTC6Q86TZ1 520 aa20.75■□□□□ 0.91
RAB39A-201ENST00000320578 CDK5RAP2Q96SN8 1893 aa20.75■□□□□ 0.91
RAB39A-201ENST00000320578 TCHHQ07283 1943 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 FOCADQ5VW36 1801 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 WDHD1O75717 1129 aaPredicted RBP20.74■□□□□ 0.91
RAB39A-201ENST00000320578 DEXIO95424 95 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 CRKP46108 304 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 AOC3Q16853 763 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 CCDC144CPQ8IYA2 1237 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 DYNLL2Q96FJ2 89 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 RNF26Q9BY78 433 aaPredicted RBP20.74■□□□□ 0.91
RAB39A-201ENST00000320578 ZNF219Q9P2Y4 722 aaPredicted RBP20.74■□□□□ 0.91
RAB39A-201ENST00000320578 SERPINA10Q9UK55 444 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 GOLGA6L3A6NEY3 463 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 CDK8P49336 464 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 FAM47AQ5JRC9 791 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 RCSD1Q6JBY9 416 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 LEO1Q8WVC0 666 aaPredicted RBP20.74■□□□□ 0.91
RAB39A-201ENST00000320578 PHKBQ93100 1093 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 SPATA32Q96LK8 384 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 USP40Q9NVE5 1235 aa20.74■□□□□ 0.91
RAB39A-201ENST00000320578 MYO3BQ8WXR4 1341 aa20.73■□□□□ 0.91
RAB39A-201ENST00000320578 F8W031 263 aaPredicted RBP20.73■□□□□ 0.91
RAB39A-201ENST00000320578 RASA1P20936 1047 aa20.73■□□□□ 0.91
RAB39A-201ENST00000320578 ZSCAN23Q3MJ62 389 aa20.73■□□□□ 0.91
RAB39A-201ENST00000320578 FAM173BQ6P4H8 233 aa20.73■□□□□ 0.91
RAB39A-201ENST00000320578 NUP133Q8WUM0 1156 aa20.73■□□□□ 0.91
RAB39A-201ENST00000320578 MXD3Q9BW11 206 aa20.73■□□□□ 0.91
RAB39A-201ENST00000320578 SLC26A6Q9BXS9 759 aa20.73■□□□□ 0.91
RAB39A-201ENST00000320578 SAP30BPQ9UHR5 308 aaKnown RBP20.73■□□□□ 0.91
RAB39A-201ENST00000320578 RCOR1Q9UKL0 485 aa20.73■□□□□ 0.91
RAB39A-201ENST00000320578 CDC42EP5Q6NZY7 148 aa20.72■□□□□ 0.91
RAB39A-201ENST00000320578 NEDD1Q8NHV4 660 aa20.72■□□□□ 0.91
RAB39A-201ENST00000320578 KCNQ5Q9NR82 932 aa20.72■□□□□ 0.91
RAB39A-201ENST00000320578 IL17RBQ9NRM6 502 aa20.72■□□□□ 0.91
RAB39A-201ENST00000320578 TMEM63CQ9P1W3 806 aa20.72■□□□□ 0.91
RAB39A-201ENST00000320578 ZNF646O15015 1829 aaPredicted RBP20.72■□□□□ 0.91
RAB39A-201ENST00000320578 PRPF3O43395 683 aaKnown RBP20.71■□□□□ 0.91
RAB39A-201ENST00000320578 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 NOVP48745 357 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 KIF23Q02241 960 aaPredicted RBP20.71■□□□□ 0.91
RAB39A-201ENST00000320578 GABPAQ06546 454 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 FUT2Q10981 343 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 TRIM29Q14134 588 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 ILDR1Q86SU0 546 aaPredicted RBP20.71■□□□□ 0.91
RAB39A-201ENST00000320578 PIM2Q9P1W9 311 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 PPFIA3O75145 1194 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 SCNN1DP51172 638 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 GUCY1B3Q02153 619 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 KRT40Q6A162 431 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 IDI2Q9BXS1 227 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 SWAP70Q9UH65 585 aa20.71■□□□□ 0.91
RAB39A-201ENST00000320578 LETM1O95202 739 aaPredicted RBP20.7■□□□□ 0.9
RAB39A-201ENST00000320578 KIF5BP33176 963 aa20.7■□□□□ 0.9
RAB39A-201ENST00000320578 TMTC3Q6ZXV5 915 aa20.7■□□□□ 0.9
RAB39A-201ENST00000320578 CTCFLQ8NI51 663 aaPredicted RBP20.7■□□□□ 0.9
RAB39A-201ENST00000320578 OSBPL5Q9H0X9 879 aaPredicted RBP20.7■□□□□ 0.9
RAB39A-201ENST00000320578 KAT14Q9H8E8 782 aa20.7■□□□□ 0.9
RAB39A-201ENST00000320578 TFIP11Q9UBB9 837 aaKnown RBP20.7■□□□□ 0.9
RAB39A-201ENST00000320578 PLIN4Q96Q06 1357 aa20.7■□□□□ 0.9
RAB39A-201ENST00000320578 NMT2O60551 498 aa20.69■□□□□ 0.9
RAB39A-201ENST00000320578 U2AF2P26368 475 aaKnown RBP eCLIP20.69■□□□□ 0.9
RAB39A-201ENST00000320578 FOSBP53539 338 aa20.69■□□□□ 0.9
RAB39A-201ENST00000320578 EHD4Q9H223 541 aa20.69■□□□□ 0.9
RAB39A-201ENST00000320578 RTEL1Q9NZ71 1219 aa20.69■□□□□ 0.9
RAB39A-201ENST00000320578 SCN9AQ15858 1988 aa20.69■□□□□ 0.9
RAB39A-201ENST00000320578 YDJCA8MPS7 323 aa20.69■□□□□ 0.9
RAB39A-201ENST00000320578 OTUD7BQ6GQQ9 843 aa20.69■□□□□ 0.9
RAB39A-201ENST00000320578 KIAA0825Q8IV33 1275 aa20.69■□□□□ 0.9
RAB39A-201ENST00000320578 DDX4Q9NQI0 724 aaKnown RBP20.69■□□□□ 0.9
RAB39A-201ENST00000320578 RBM27Q9P2N5 1060 aaKnown RBP20.69■□□□□ 0.9
RAB39A-201ENST00000320578 MYH1P12882 1939 aa20.68■□□□□ 0.9
RAB39A-201ENST00000320578 ZBTB7AO95365 584 aa20.68■□□□□ 0.9
RAB39A-201ENST00000320578 MRE11P49959 708 aa20.68■□□□□ 0.9
RAB39A-201ENST00000320578 GNAQP50148 359 aa20.68■□□□□ 0.9
RAB39A-201ENST00000320578 AKAP17AQ02040 695 aaKnown RBP20.68■□□□□ 0.9
RAB39A-201ENST00000320578 CCDC183Q5T5S1 534 aa20.68■□□□□ 0.9
RAB39A-201ENST00000320578 MYSM1Q5VVJ2 828 aa20.68■□□□□ 0.9
RAB39A-201ENST00000320578 SLC44A5Q8NCS7 719 aa20.68■□□□□ 0.9
RAB39A-201ENST00000320578 DHX36Q9H2U1 1008 aaKnown RBP20.68■□□□□ 0.9
RAB39A-201ENST00000320578 POLR3EQ9NVU0 708 aa20.68■□□□□ 0.9
RAB39A-201ENST00000320578 VIL1P09327 827 aaKnown RBP20.67■□□□□ 0.9
RAB39A-201ENST00000320578 AIFM3Q96NN9 605 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 USP28Q96RU2 1077 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 YEATS4O95619 227 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 HLA-DOAP06340 250 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 XBP1P17861 261 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 PSME4Q14997 1843 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 SAFBQ15424 915 aaKnown RBP eCLIP20.67■□□□□ 0.9
RAB39A-201ENST00000320578 SLC4A8Q2Y0W8 1093 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 PNMA1Q8ND90 353 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 SERPINB13Q9UIV8 391 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 CD2APQ9Y5K6 639 aa20.67■□□□□ 0.9
RAB39A-201ENST00000320578 MYH15Q9Y2K3 1946 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms