RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MICU3Q86XE3 530 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 CCDC144CPQ8IYA2 1237 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 RNF41Q9H4P4 317 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-201ENST00000317677 ATP8A2Q9NTI2 1148 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 GJB4Q9NTQ9 266 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 FOCADQ5VW36 1801 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 FAM205AQ6ZU69 1335 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 PRDM1O75626 825 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 CAPN2P17655 700 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 PPP4CP60510 307 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-201ENST00000317677 TTC12Q9H892 705 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-201ENST00000317677 EFCC1Q9HA90 598 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 H3BQV1 296 aa15.1■□□□□ 0.01
CPNE1-201ENST00000317677 ZBTB43O43298 467 aa15.1■□□□□ 0.01
CPNE1-201ENST00000317677 RANBP6O60518 1105 aaKnown RBP15.1■□□□□ 0.01
CPNE1-201ENST00000317677 USP17L8P0C7I0 530 aa15.1■□□□□ 0.01
CPNE1-201ENST00000317677 ALDH1B1P30837 517 aa15.1■□□□□ 0.01
CPNE1-201ENST00000317677 SBK1Q52WX2 424 aa15.1■□□□□ 0.01
CPNE1-201ENST00000317677 IFFO2Q5TF58 517 aa15.1■□□□□ 0.01
CPNE1-201ENST00000317677 C2CD5Q86YS7 1000 aa15.1■□□□□ 0.01
CPNE1-201ENST00000317677 MPNDQ8N594 471 aa15.1■□□□□ 0.01
CPNE1-201ENST00000317677 TFIP11Q9UBB9 837 aaKnown RBP15.1■□□□□ 0.01
CPNE1-201ENST00000317677 ORC3Q9UBD5 711 aaPredicted RBP15.1■□□□□ 0.01
CPNE1-201ENST00000317677 UBE2Q2LH0YL09 131 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 CHRNA5P30532 468 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 KRT222Q8N1A0 295 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 AIFM3Q96NN9 605 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 MTA3Q9BTC8 594 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 UTRNP46939 3433 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 GOLGA8AA7E2F4 631 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 ADCY5O95622 1261 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 MMP14P50281 582 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 KRT85P78386 507 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 WTAPQ15007 396 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 MFSD14BQ5SR56 506 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 NFXL1Q6ZNB6 911 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 CERS5Q8N5B7 392 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 ZNF784Q8NCA9 323 aaPredicted RBP15.09■□□□□ 0.01
CPNE1-201ENST00000317677 KIF18AQ8NI77 898 aa15.09■□□□□ 0.01
CPNE1-201ENST00000317677 ZNF622Q969S3 477 aaKnown RBP eCLIP15.09■□□□□ 0.014e-6■■□□□ 12.1
CPNE1-201ENST00000317677 TNKSO95271 1327 aa15.08■□□□□ 0.01
CPNE1-201ENST00000317677 SCN9AQ15858 1988 aa15.08■□□□□ 0.01
CPNE1-201ENST00000317677 DHX16O60231 1041 aaKnown RBP15.08■□□□□ 0
CPNE1-201ENST00000317677 DPEP1P16444 411 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 UBE2HP62256 183 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 GTF2IP78347 998 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 GSTO1P78417 241 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 SLC4A8Q2Y0W8 1093 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 ESR2Q92731 530 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 PHKBQ93100 1093 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 CHMP4CQ96CF2 233 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 COA1Q9GZY4 146 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 ARPP21Q9UBL0 812 aaPredicted RBP15.08■□□□□ 0
CPNE1-201ENST00000317677 SLC12A7Q9Y666 1083 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 GAKO14976 1311 aa15.08■□□□□ 0
CPNE1-201ENST00000317677 BRCA1P38398 1863 aaKnown RBP15.07■□□□□ 0
CPNE1-201ENST00000317677 GPR75-ASB3A0A0A6YYF3 556 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 CCDC69A6NI79 296 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 CPLX1O14810 134 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 ORC4O43929 436 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 BTDP43251 543 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 DOK7Q18PE1 504 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 TPRNQ4KMQ1 711 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 DPP8Q6V1X1 898 aaPredicted RBP15.07■□□□□ 0
CPNE1-201ENST00000317677 ENAHQ8N8S7 591 aaPredicted RBP15.07■□□□□ 0
CPNE1-201ENST00000317677 LEO1Q8WVC0 666 aaPredicted RBP15.07■□□□□ 0
CPNE1-201ENST00000317677 MXD3Q9BW11 206 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 FTOQ9C0B1 505 aaKnown RBP eCLIP15.07■□□□□ 0
CPNE1-201ENST00000317677 ZSCAN16Q9H4T2 348 aaPredicted RBP15.07■□□□□ 0
CPNE1-201ENST00000317677 ELP1O95163 1332 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 MYH1P12882 1939 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 SMTNL1A8MU46 457 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 RHBDL3P58872 404 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 C12orf60Q5U649 245 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 STYK1Q6J9G0 422 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 ZNF654Q8IZM8 581 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 MCM9Q9NXL9 1143 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 PIM2Q9P1W9 311 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 BCS1LQ9Y276 419 aa15.07■□□□□ 0
CPNE1-201ENST00000317677 ROBO3Q96MS0 1386 aa15.06■□□□□ 0
CPNE1-201ENST00000317677 KIF28PB7ZC32 967 aa15.06■□□□□ 0
CPNE1-201ENST00000317677 C17orf53Q8N3J3 647 aaPredicted RBP15.06■□□□□ 0
CPNE1-201ENST00000317677 FBXO18Q8NFZ0 1043 aa15.06■□□□□ 0
CPNE1-201ENST00000317677 TGFBRAP1Q8WUH2 860 aa15.06■□□□□ 0
CPNE1-201ENST00000317677 FAM163AQ96GL9 167 aaPredicted RBP15.06■□□□□ 0
CPNE1-201ENST00000317677 ZSCAN10Q96SZ4 725 aaPredicted RBP15.06■□□□□ 0
CPNE1-201ENST00000317677 USP25Q9UHP3 1055 aa15.06■□□□□ 0
CPNE1-201ENST00000317677 H0YIN7 160 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 NMT2O60551 498 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 LDHCP07864 332 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 PCP11498 1178 aaKnown RBP15.05■□□□□ 0
CPNE1-201ENST00000317677 SART3Q15020 963 aaKnown RBP15.05■□□□□ 0
CPNE1-201ENST00000317677 FAM47AQ5JRC9 791 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 TBC1D22AQ8WUA7 517 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 C7orf43Q8WVR3 580 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 DYNLL2Q96FJ2 89 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 PGBD1Q96JS3 809 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 C8orf76Q96K31 380 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms