RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 MMP10P09238 476 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 STK3Q13188 491 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 RABL6Q3YEC7 729 aaPredicted RBP13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 NECAB1Q8N987 351 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 THOC1Q96FV9 657 aaKnown RBP13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 CUL4AQ13619 759 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 CCDC114Q96M63 670 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 TM4SF1P30408 202 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 TTC6Q86TZ1 520 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 FUT8Q9BYC5 575 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 SUDS3Q9H7L9 328 aaPredicted RBP13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 CCDC151A5D8V7 595 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 MYO1FO00160 1098 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 CPA1P15085 419 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 DDR1Q08345 913 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 POLA2Q14181 598 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 R3HDM1Q15032 1099 aaKnown RBP13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 BRD3Q15059 726 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 L2HGDHQ9H9P8 463 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 AKAP2Q9Y2D5 859 aa13.26□□□□□ -0.29
LDLRAD3-201ENST00000315571 CAVIN2O95810 425 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 IFIT5Q13325 482 aaKnown RBP13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 FAM76AQ8TAV0 307 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 TBC1D22AQ8WUA7 517 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 DCTPP1Q9H773 170 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 RNF40O75150 1001 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 TSGA10IPQ3SY00 556 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 HSP90AB4PQ58FF6 505 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 IQUBQ8NA54 791 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 FAM71BQ8TC56 605 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 RABGGTAQ92696 567 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 FUCA2Q9BTY2 467 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 POLRMTO00411 1230 aaKnown RBP13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 PPP1R12BO60237 982 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 NR1I2O75469 434 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 PDCP20941 246 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 TXLNAP40222 546 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 CCZ1BP86790 482 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 CCZ1P86791 482 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 G3BP1Q13283 466 aaKnown RBP eCLIP13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 E4F1Q66K89 784 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 TTLL11Q8NHH1 800 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 SIL1Q9H173 461 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 PA2G4Q9UQ80 394 aaKnown RBP13.25□□□□□ -0.29
LDLRAD3-201ENST00000315571 LMOD1P29536 600 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 PPARDQ03181 441 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 PRR5LQ6MZQ0 368 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 SLC16A10Q8TF71 515 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 ABCC12Q96J65 1359 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 GOLGA6L7A0A1B0GV03 622 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 ANAPC15P60006 121 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 SAAL1Q96ER3 474 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 ANKRD18BA2A2Z9 1011 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 TOP1P11387 765 aaKnown RBP13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 ME1P48163 572 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 AK2P54819 239 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 KLHDC4Q8TBB5 520 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 GREM2Q9H772 168 aa13.24□□□□□ -0.29
LDLRAD3-201ENST00000315571 CSF1RP07333 972 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 ITGA6P23229 1130 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 NFXL1Q6ZNB6 911 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 MICALCLQ6ZW33 695 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 GOPCQ9HD26 462 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 PES1O00541 588 aaKnown RBP13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 SLC10A5Q5PT55 438 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 TMEM87AQ8NBN3 555 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 DYDC1Q8WWB3 177 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 KAT2BQ92831 832 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 LZTFL1Q9NQ48 299 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 SETSIPP0DME0 302 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 RWDD2BP57060 319 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 HSP90AA4PQ58FG1 418 aa13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 JAKMIP1Q96N16 626 aaKnown RBP13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 XPO4Q9C0E2 1151 aaKnown RBP13.23□□□□□ -0.29
LDLRAD3-201ENST00000315571 RANBP1P43487 201 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 C11orf57Q6ZUT1 292 aaPredicted RBP13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 ZBTB7AO95365 584 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 CASP8Q14790 479 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 CCDC97Q96F63 343 aaPredicted RBP13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 GOLGA6CA6NDK9 693 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 TMCO5BA8MYB1 307 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 GOLGA6DP0CG33 693 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 CCNHP51946 323 aaPredicted RBP13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 ATRIPQ8WXE1 791 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 TBC1D31Q96DN5 1066 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms