RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 ENOX1Q8TC92 643 aaKnown RBP8.67□□□□□ -1.02
RSF1-201ENST00000308488 LEO1Q8WVC0 666 aaPredicted RBP8.67□□□□□ -1.02
RSF1-201ENST00000308488 GMEB1Q9Y692 573 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 H0YC42 278 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 VIL1P09327 827 aaKnown RBP8.67□□□□□ -1.02
RSF1-201ENST00000308488 CCDC159P0C7I6 412 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 HS2ST1Q7LGA3 356 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 THOC1Q96FV9 657 aaKnown RBP8.67□□□□□ -1.02
RSF1-201ENST00000308488 NUDCD1Q96RS6 583 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 SLC40A1Q9NP59 571 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 LIN7AO14910 233 aaPredicted RBP8.67□□□□□ -1.02
RSF1-201ENST00000308488 BLMP54132 1417 aaPredicted RBP8.67□□□□□ -1.02
RSF1-201ENST00000308488 BBOF1Q8ND07 529 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 PPP1R14BQ96C90 147 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 SPTLC2O15270 562 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 STX2P32856 288 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 RAB17Q9H0T7 212 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 EEF1DP29692 281 aaKnown RBP8.67□□□□□ -1.02
RSF1-201ENST00000308488 SAFB2Q14151 953 aaKnown RBP eCLIP8.67□□□□□ -1.02
RSF1-201ENST00000308488 TMEM154Q6P9G4 183 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 GID8Q9NWU2 228 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 KIAA1107Q9UPP5 1409 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 ARPC4P59998 168 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 KCNV2Q8TDN2 545 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 CD248Q9HCU0 757 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 SH3BP1Q9Y3L3 701 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 GORASP1Q9BQQ3 440 aa8.67□□□□□ -1.02
RSF1-201ENST00000308488 PARD3Q8TEW0 1356 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 SMARCA5O60264 1052 aaPredicted RBP8.66□□□□□ -1.02
RSF1-201ENST00000308488 PRPF31Q8WWY3 499 aaKnown RBP8.66□□□□□ -1.02
RSF1-201ENST00000308488 BRF1Q92994 677 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 IL1RAPL1Q9NZN1 696 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 ABCF2Q9UG63 623 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 FHOD3Q2V2M9 1422 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 STX10O60499 249 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 ALDH1L1O75891 902 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 CCDC43Q96MW1 224 aaKnown RBP8.66□□□□□ -1.02
RSF1-201ENST00000308488 E7ENQ6 273 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 CSB-PGBD3P0DP91 1061 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 NDEL1Q9GZM8 345 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 NDUFA13Q9P0J0 144 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 PTPN23Q9H3S7 1636 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 MYH6P13533 1939 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 RASGRF2O14827 1237 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 TSPAN9O75954 239 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 LONP1P36776 959 aaKnown RBP8.66□□□□□ -1.02
RSF1-201ENST00000308488 NSMCE1Q8WV22 266 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 FGFR1OP2Q9NVK5 253 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 CTTNBP2Q8WZ74 1663 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 ANKRD65E5RJM6 399 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 ANKRD20A4Q4UJ75 823 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 ANKRD20A8PQ5CZ79 823 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 ANKRD20A2Q5SQ80 823 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 ANKRD20A1Q5TYW2 823 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 NUGGCQ68CJ6 796 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 RAD23BP54727 409 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 PSMC1P62191 440 aaKnown RBP8.66□□□□□ -1.02
RSF1-201ENST00000308488 DMPKQ09013 629 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 SH3GL1Q99961 368 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 MLH1P40692 756 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 UBXN1Q04323 297 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 KRT72Q14CN4 511 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 NR1H4Q96RI1 486 aaPredicted RBP8.66□□□□□ -1.02
RSF1-201ENST00000308488 EPS15L1Q9UBC2 864 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 SSH2Q76I76 1423 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 CTNND1O60716 968 aaKnown RBP8.66□□□□□ -1.02
RSF1-201ENST00000308488 CCDC25Q86WR0 208 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 DKC1O60832 514 aaKnown RBP eCLIP8.66□□□□□ -1.024e-7■■■■■ 32.2
RSF1-201ENST00000308488 CCDC15Q0P6D6 951 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 TNIP1Q15025 636 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 C3orf20Q8ND61 904 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 SNX29Q8TEQ0 813 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 SYTL4Q96C24 671 aaPredicted RBP8.66□□□□□ -1.02
RSF1-201ENST00000308488 TRIM47Q96LD4 638 aa8.66□□□□□ -1.02
RSF1-201ENST00000308488 KCNA3P22001 575 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 PDCLQ13371 301 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 HYOU1Q9Y4L1 999 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 RPS6KA3P51812 740 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
RSF1-201ENST00000308488 NRBF2Q96F24 287 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 VCPKMTQ9H867 229 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 CARD8Q9Y2G2 431 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 ZWINTO95229 277 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 TUBA3CQ13748 450 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 RRAGBQ5VZM2 374 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 DNAJC9Q8WXX5 260 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 SEPT3Q9UH03 358 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 CPP00450 1065 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 ACADSP16219 412 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 KBTBD12Q3ZCT8 623 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 CCDC138Q96M89 665 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 CARD9Q9H257 536 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 ATXN10Q9UBB4 475 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 TSPYL4Q9UJ04 414 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 RALGAPBQ86X10 1494 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 KCNJ6P48051 423 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 DESI2Q9BSY9 194 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 A1CFQ9NQ94 594 aaKnown RBP8.65□□□□□ -1.02
RSF1-201ENST00000308488 TRPC6Q9Y210 931 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms