RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
SSH3-201ENST00000308127 MRFAP1Q9Y605 127 aa18.93■□□□□ 0.62
SSH3-201ENST00000308127 AKAP11Q9UKA4 1901 aa18.93■□□□□ 0.62
SSH3-201ENST00000308127 MAP3K9P80192 1104 aa18.93■□□□□ 0.62
SSH3-201ENST00000308127 MORC3Q14149 939 aa18.93■□□□□ 0.62
SSH3-201ENST00000308127 TTF1Q15361 905 aaPredicted RBP18.93■□□□□ 0.62
SSH3-201ENST00000308127 SGMS1Q86VZ5 419 aa18.93■□□□□ 0.62
SSH3-201ENST00000308127 ACRBPQ8NEB7 543 aa18.93■□□□□ 0.62
SSH3-201ENST00000308127 ABCF2Q9UG63 623 aa18.93■□□□□ 0.62
SSH3-201ENST00000308127 ACTN4O43707 911 aaKnown RBP18.92■□□□□ 0.62
SSH3-201ENST00000308127 IFNAR1P17181 557 aa18.92■□□□□ 0.62
SSH3-201ENST00000308127 ZNF174Q15697 407 aa18.92■□□□□ 0.62
SSH3-201ENST00000308127 IGSF22Q8N9C0 903 aa18.92■□□□□ 0.62
SSH3-201ENST00000308127 SLC4A9Q96Q91 983 aa18.92■□□□□ 0.62
SSH3-201ENST00000308127 MAP3K15Q6ZN16 1313 aa18.92■□□□□ 0.62
SSH3-201ENST00000308127 CDC5LQ99459 802 aaKnown RBP18.92■□□□□ 0.62
SSH3-201ENST00000308127 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
SSH3-201ENST00000308127 LMTK3Q96Q04 1460 aa18.92■□□□□ 0.62
SSH3-201ENST00000308127 TNS3Q68CZ2 1445 aa18.92■□□□□ 0.62
SSH3-201ENST00000308127 FAM237AA0A1B0GTK4 181 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 CYP2C19P33261 490 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 DPYDQ12882 1025 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 MCM6Q14566 821 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 SMC1AQ14683 1233 aaKnown RBP18.91■□□□□ 0.62
SSH3-201ENST00000308127 WDR19Q8NEZ3 1342 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 VGLL3A8MV65 326 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 STX10O60499 249 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 CASP14P31944 242 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 ADGRA1Q86SQ6 560 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 CRACR2BQ8N4Y2 399 aaPredicted RBP18.91■□□□□ 0.62
SSH3-201ENST00000308127 LAMB4A4D0S4 1761 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 CCDC66A2RUB6 948 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 RHOXF2BP0C7M4 288 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 MAP3K12Q12852 859 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 ZNF569Q5MCW4 686 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 ZNF654Q8IZM8 581 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 EEF2KMTQ96G04 330 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 MPHOSPH8Q99549 860 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 RHOXF2Q9BQY4 288 aa18.91■□□□□ 0.62
SSH3-201ENST00000308127 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.91■□□□□ 0.62
SSH3-201ENST00000308127 PLEKHA8P1O95397 391 aa18.9■□□□□ 0.62
SSH3-201ENST00000308127 NUTM2AQ8IVF1 878 aaPredicted RBP18.9■□□□□ 0.62
SSH3-201ENST00000308127 ENOX1Q8TC92 643 aaKnown RBP18.9■□□□□ 0.62
SSH3-201ENST00000308127 SYMPKQ92797 1274 aaKnown RBP18.9■□□□□ 0.62
SSH3-201ENST00000308127 LRP2BPQ9P2M1 347 aa18.9■□□□□ 0.62
SSH3-201ENST00000308127 HOOK1Q9UJC3 728 aaKnown RBP18.9■□□□□ 0.62
SSH3-201ENST00000308127 TFR2Q9UP52 801 aa18.9■□□□□ 0.62
SSH3-201ENST00000308127 ERICH2A1L162 156 aa18.9■□□□□ 0.62
SSH3-201ENST00000308127 AKR1B15C9JRZ8 316 aaPredicted RBP18.9■□□□□ 0.62
SSH3-201ENST00000308127 RNF225M0QZC1 329 aaPredicted RBP18.9■□□□□ 0.62
SSH3-201ENST00000308127 NR1I3Q14994 352 aa18.9■□□□□ 0.62
SSH3-201ENST00000308127 MLKLQ8NB16 471 aa18.9■□□□□ 0.62
SSH3-201ENST00000308127 FANCBQ8NB91 859 aa18.9■□□□□ 0.62
SSH3-201ENST00000308127 H3BQF6 201 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 ADAMTS3O15072 1205 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 STARD3NLO95772 234 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 LIFRP42702 1097 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 PUM3Q15397 648 aaKnown RBP18.89■□□□□ 0.61
SSH3-201ENST00000308127 VPS16Q9H269 839 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 CTNND2Q9UQB3 1225 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 MYH7P12883 1935 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 SARSP49591 514 aaKnown RBP18.89■□□□□ 0.61
SSH3-201ENST00000308127 FXR1P51114 621 aaKnown RBP eCLIP18.89■□□□□ 0.61
SSH3-201ENST00000308127 IRX5P78411 483 aaPredicted RBP18.89■□□□□ 0.61
SSH3-201ENST00000308127 RILPL1Q5EBL4 403 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 PPFIBP1Q86W92 1011 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 UBAC1Q9BSL1 405 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 ARFGAP3Q9NP61 516 aa18.89■□□□□ 0.61
SSH3-201ENST00000308127 V9GY48 417 aaPredicted RBP18.89■□□□□ 0.61
SSH3-201ENST00000308127 ECM29Q5VYK3 1845 aa18.88■□□□□ 0.61
SSH3-201ENST00000308127 SPEF2Q9C093 1822 aa18.88■□□□□ 0.61
SSH3-201ENST00000308127 PLCD1P51178 756 aa18.88■□□□□ 0.61
SSH3-201ENST00000308127 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
SSH3-201ENST00000308127 PLA2G12BQ9BX93 195 aa18.88■□□□□ 0.61
SSH3-201ENST00000308127 SRRTQ9BXP5 876 aaKnown RBP18.88■□□□□ 0.61
SSH3-201ENST00000308127 SYNRGQ9UMZ2 1314 aa18.88■□□□□ 0.61
SSH3-201ENST00000308127 CCDC175P0C221 793 aa18.88■□□□□ 0.61
SSH3-201ENST00000308127 VEGFAP15692 232 aaPredicted RBP18.88■□□□□ 0.61
SSH3-201ENST00000308127 ARID4AP29374 1257 aaPredicted RBP18.88■□□□□ 0.61
SSH3-201ENST00000308127 FBXO3Q9UK99 471 aa18.88■□□□□ 0.61
SSH3-201ENST00000308127 TNKSO95271 1327 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 HSPA2P54652 639 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 KIF4BQ2VIQ3 1234 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 RSRC2Q7L4I2 434 aaKnown RBP18.87■□□□□ 0.61
SSH3-201ENST00000308127 APTXQ7Z2E3 356 aaKnown RBP18.87■□□□□ 0.61
SSH3-201ENST00000308127 LPIN2Q92539 896 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 PNKPQ96T60 521 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 SRPRBQ9Y5M8 271 aaKnown RBP18.87■□□□□ 0.61
SSH3-201ENST00000308127 ADGRG1Q9Y653 693 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 N4BP1O75113 896 aaKnown RBP18.87■□□□□ 0.61
SSH3-201ENST00000308127 DEXIO95424 95 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 SART3Q15020 963 aaKnown RBP18.87■□□□□ 0.61
SSH3-201ENST00000308127 LONRF2Q1L5Z9 754 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 TICAM2Q86XR7 235 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 GOLGA1Q92805 767 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 PAGE5Q96GU1 130 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 PES1O00541 588 aaKnown RBP18.87■□□□□ 0.61
SSH3-201ENST00000308127 PHACTR2O75167 634 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 CHMP4BP1P59074 171 aa18.87■□□□□ 0.61
SSH3-201ENST00000308127 AKAP17AQ02040 695 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms