RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.82■■■□□ 2.84
CHCHD4-201ENST00000295767 CNNM2Q9H8M5 875 aa32.82■■■□□ 2.84
CHCHD4-201ENST00000295767 GBA2Q9HCG7 927 aaPredicted RBP32.82■■■□□ 2.84
CHCHD4-201ENST00000295767 B4E1Z4 1266 aa32.81■■■□□ 2.84
CHCHD4-201ENST00000295767 GDF11O95390 407 aa32.81■■■□□ 2.84
CHCHD4-201ENST00000295767 MAP3K11Q16584 847 aa32.81■■■□□ 2.84
CHCHD4-201ENST00000295767 SHROOM1Q2M3G4 852 aaPredicted RBP32.81■■■□□ 2.84
CHCHD4-201ENST00000295767 RANBP6O60518 1105 aaKnown RBP32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 AKR1B1P15121 316 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 IREB2P48200 963 aaKnown RBP32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 RBM25P49756 843 aaKnown RBP32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 TRDNQ13061 729 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 KRT32Q14532 448 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 NCOA7Q8NI08 942 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 KRT23Q9C075 422 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 CAP2P40123 477 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 ANAPC15P60006 121 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 JAG1P78504 1218 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 FAM47AQ5JRC9 791 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 ARMC9Q7Z3E5 817 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 CCDC17Q96LX7 622 aa32.8■■■□□ 2.84
CHCHD4-201ENST00000295767 KDM4AO75164 1064 aa32.79■■■□□ 2.84
CHCHD4-201ENST00000295767 COL9A3Q14050 684 aaPredicted RBP32.79■■■□□ 2.84
CHCHD4-201ENST00000295767 RALYLQ86SE5 291 aaKnown RBP32.79■■■□□ 2.84
CHCHD4-201ENST00000295767 ESR2Q92731 530 aa32.79■■■□□ 2.84
CHCHD4-201ENST00000295767 ZKSCAN4Q969J2 545 aaPredicted RBP32.79■■■□□ 2.84
CHCHD4-201ENST00000295767 TBC1D32Q96NH3 1257 aa32.79■■■□□ 2.84
CHCHD4-201ENST00000295767 FKBP1BP68106 108 aa32.78■■■□□ 2.84
CHCHD4-201ENST00000295767 ABCB5Q2M3G0 1257 aa32.78■■■□□ 2.84
CHCHD4-201ENST00000295767 C2orf69Q8N8R5 385 aa32.78■■■□□ 2.84
CHCHD4-201ENST00000295767 JAKMIP1Q96N16 626 aaKnown RBP32.78■■■□□ 2.84
CHCHD4-201ENST00000295767 TSPY2A6NKD2 308 aa32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 CTNND1O60716 968 aaKnown RBP32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 TFAP4Q01664 338 aa32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 MB21D2Q8IYB1 491 aaPredicted RBP32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 NEK1Q96PY6 1258 aa32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 UBE2Q2LH0YL09 131 aa32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 MPHOSPH10O00566 681 aaKnown RBP32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 TSPY3P0CV98 308 aa32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 TSPY8P0CW00 308 aa32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 MAP3K9P80192 1104 aa32.77■■■□□ 2.84
CHCHD4-201ENST00000295767 PHIPQ8WWQ0 1821 aa32.76■■■□□ 2.84
CHCHD4-201ENST00000295767 GH2P01242 217 aa32.76■■■□□ 2.83
CHCHD4-201ENST00000295767 IL17RAQ96F46 866 aa32.76■■■□□ 2.83
CHCHD4-201ENST00000295767 ZSWIM5Q9P217 1185 aa32.76■■■□□ 2.83
CHCHD4-201ENST00000295767 ZBTB21Q9ULJ3 1066 aa32.76■■■□□ 2.83
CHCHD4-201ENST00000295767 PLIN4Q96Q06 1357 aa32.75■■■□□ 2.83
CHCHD4-201ENST00000295767 VGLL4Q14135 290 aa32.75■■■□□ 2.83
CHCHD4-201ENST00000295767 CYB5R4Q7L1T6 521 aa32.75■■■□□ 2.83
CHCHD4-201ENST00000295767 SCYL3Q8IZE3 742 aa32.75■■■□□ 2.83
CHCHD4-201ENST00000295767 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.75■■■□□ 2.83
CHCHD4-201ENST00000295767 MYH4Q9Y623 1939 aa32.75■■■□□ 2.83
CHCHD4-201ENST00000295767 NT5C2P49902 561 aa32.74■■■□□ 2.83
CHCHD4-201ENST00000295767 LDLRAD1Q5T700 205 aa32.74■■■□□ 2.83
CHCHD4-201ENST00000295767 ANKRD13AQ8IZ07 590 aa32.74■■■□□ 2.83
CHCHD4-201ENST00000295767 NEDD1Q8NHV4 660 aa32.74■■■□□ 2.83
CHCHD4-201ENST00000295767 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.74■■■□□ 2.83
CHCHD4-201ENST00000295767 CABP5Q9NP86 173 aa32.74■■■□□ 2.83
CHCHD4-201ENST00000295767 GUCY1A2P33402 732 aa32.73■■■□□ 2.83
CHCHD4-201ENST00000295767 NOL9Q5SY16 702 aaKnown RBP32.73■■■□□ 2.83
CHCHD4-201ENST00000295767 ASNSP08243 561 aa32.73■■■□□ 2.83
CHCHD4-201ENST00000295767 TMEM179Q6ZVK1 233 aa32.73■■■□□ 2.83
CHCHD4-201ENST00000295767 CLMNQ96JQ2 1002 aa32.73■■■□□ 2.83
CHCHD4-201ENST00000295767 KIF2CQ99661 725 aa32.73■■■□□ 2.83
CHCHD4-201ENST00000295767 CSADQ9Y600 493 aa32.73■■■□□ 2.83
CHCHD4-201ENST00000295767 SNCAIPQ9Y6H5 919 aa32.73■■■□□ 2.83
CHCHD4-201ENST00000295767 CASTP20810 708 aaKnown RBP32.72■■■□□ 2.83
CHCHD4-201ENST00000295767 PSMA5P28066 241 aa32.72■■■□□ 2.83
CHCHD4-201ENST00000295767 ANTXR2P58335 489 aa32.72■■■□□ 2.83
CHCHD4-201ENST00000295767 CHST3Q7LGC8 479 aa32.72■■■□□ 2.83
CHCHD4-201ENST00000295767 NMT2O60551 498 aa32.71■■■□□ 2.83
CHCHD4-201ENST00000295767 CPA1P15085 419 aa32.71■■■□□ 2.83
CHCHD4-201ENST00000295767 SEPT2Q15019 361 aa32.71■■■□□ 2.83
CHCHD4-201ENST00000295767 ZKSCAN3Q9BRR0 538 aa32.71■■■□□ 2.83
CHCHD4-201ENST00000295767 TM6SF1Q9BZW5 370 aa32.71■■■□□ 2.83
CHCHD4-201ENST00000295767 GINM1Q9NU53 330 aa32.71■■■□□ 2.83
CHCHD4-201ENST00000295767 RAB3GAP1Q15042 981 aa32.7■■■□□ 2.83
CHCHD4-201ENST00000295767 BLOC1S2Q6QNY1 142 aa32.7■■■□□ 2.83
CHCHD4-201ENST00000295767 CLEC10AQ8IUN9 316 aa32.7■■■□□ 2.83
CHCHD4-201ENST00000295767 IL17RBQ9NRM6 502 aa32.7■■■□□ 2.83
CHCHD4-201ENST00000295767 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.7■■■□□ 2.83
CHCHD4-201ENST00000295767 IGKV6D-41A0A0C4DH26 115 aa32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 HMGB1P09429 215 aaKnown RBP32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 MCM5P33992 734 aa32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 CCDC84Q86UT8 332 aaPredicted RBP32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 UPF3BQ9BZI7 483 aaKnown RBP32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 ZSWIM6Q9HCJ5 1215 aa32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 TMEM88BA6NKF7 163 aa32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 CEP95Q96GE4 821 aa32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 ELP3Q9H9T3 547 aa32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 PICK1Q9NRD5 415 aa32.69■■■□□ 2.82
CHCHD4-201ENST00000295767 UNCXA6NJT0 531 aa32.68■■■□□ 2.82
CHCHD4-201ENST00000295767 PRC1O43663 620 aa32.68■■■□□ 2.82
CHCHD4-201ENST00000295767 HUNKP57058 714 aa32.68■■■□□ 2.82
CHCHD4-201ENST00000295767 DHX32Q7L7V1 743 aaKnown RBP32.68■■■□□ 2.82
CHCHD4-201ENST00000295767 IQCA1Q86XH1 822 aa32.68■■■□□ 2.82
CHCHD4-201ENST00000295767 TCEANC2Q96MN5 208 aa32.68■■■□□ 2.82
CHCHD4-201ENST00000295767 TCP11L1Q9NUJ3 509 aa32.68■■■□□ 2.82
CHCHD4-201ENST00000295767 PTPRAP18433 802 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms