RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 SPECC1LQ69YQ0 1117 aa11.42□□□□□ -0.58
HMGCR-201ENST00000287936 IGDCC4Q8TDY8 1250 aa11.42□□□□□ -0.58
HMGCR-201ENST00000287936 SDR42E1Q8WUS8 393 aa11.42□□□□□ -0.58
HMGCR-201ENST00000287936 TCHHQ07283 1943 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 U2AF2P26368 475 aaKnown RBP eCLIP11.41□□□□□ -0.583e-8■■■■□ 25.4
HMGCR-201ENST00000287936 ZNF579Q8NAF0 562 aaKnown RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 PPP1R13BQ96KQ4 1090 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 TCP11L1Q9NUJ3 509 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 MCM9Q9NXL9 1143 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 ARPP21Q9UBL0 812 aaPredicted RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 PARP4Q9UKK3 1724 aaKnown RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 VWA3AA6NCI4 1184 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 GSG1L2A8MUP6 293 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 GYG1P46976 350 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 PLCD1P51178 756 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 CNGA4Q8IV77 575 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 SRPRBQ9Y5M8 271 aaKnown RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 TRPM3Q9HCF6 1732 aaPredicted RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 PRDM1O75626 825 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 PTPREP23469 700 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 ERCC5P28715 1186 aaPredicted RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 ETF1P62495 437 aaKnown RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 KIF4BQ2VIQ3 1234 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 ZNF215Q9UL58 517 aaPredicted RBP11.41□□□□□ -0.58
HMGCR-201ENST00000287936 ADAMTSL3P82987 1691 aa11.41□□□□□ -0.58
HMGCR-201ENST00000287936 TSPY3P0CV98 308 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 TSPY8P0CW00 308 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 ARID5BQ14865 1188 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 AXDND1Q5T1B0 1012 aaPredicted RBP11.4□□□□□ -0.58
HMGCR-201ENST00000287936 WDHD1O75717 1129 aaPredicted RBP11.4□□□□□ -0.58
HMGCR-201ENST00000287936 KCNJ6P48051 423 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 EIF5P55010 431 aaKnown RBP11.4□□□□□ -0.58
HMGCR-201ENST00000287936 VSTM4Q8IW00 320 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 GBP3Q9H0R5 595 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 STX17P56962 302 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 AMPD3Q01432 767 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 LONRF3Q496Y0 759 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 HSP90B2PQ58FF3 399 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 JAKMIP3Q5VZ66 844 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 SHC4Q6S5L8 630 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 ENOX1Q8TC92 643 aaKnown RBP11.4□□□□□ -0.58
HMGCR-201ENST00000287936 NAA15Q9BXJ9 866 aaKnown RBP11.4□□□□□ -0.58
HMGCR-201ENST00000287936 MAN1B1Q9UKM7 699 aa11.4□□□□□ -0.58
HMGCR-201ENST00000287936 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.59
HMGCR-201ENST00000287936 PRPF3O43395 683 aaKnown RBP11.4□□□□□ -0.59
HMGCR-201ENST00000287936 MCM7P33993 719 aa11.4□□□□□ -0.59
HMGCR-201ENST00000287936 ELF2Q15723 593 aa11.4□□□□□ -0.59
HMGCR-201ENST00000287936 FAM114A1Q8IWE2 563 aa11.4□□□□□ -0.59
HMGCR-201ENST00000287936 CMTR1Q8N1G2 835 aaKnown RBP11.4□□□□□ -0.59
HMGCR-201ENST00000287936 TUBE1Q9UJT0 475 aa11.4□□□□□ -0.59
HMGCR-201ENST00000287936 CRYBG1Q9Y4K1 1723 aa11.4□□□□□ -0.59
HMGCR-201ENST00000287936 SPEF2Q9C093 1822 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 USP17L12C9JPN9 530 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 USP17L21D6R901 530 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 LDHBP07195 334 aaKnown RBP11.39□□□□□ -0.59
HMGCR-201ENST00000287936 RPS8P62241 208 aaKnown RBP11.39□□□□□ -0.59
HMGCR-201ENST00000287936 TUBB4BP68371 445 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 TRIM14Q14142 442 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 CLEC4GQ6UXB4 293 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 ZNF804AQ7Z570 1209 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 BRIP1Q9BX63 1249 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 EIF3JO75822 258 aaKnown RBP11.39□□□□□ -0.59
HMGCR-201ENST00000287936 PIK3AP1Q6ZUJ8 805 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 TXLNBQ8N3L3 684 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 IGSF22Q8N9C0 903 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 RPGRQ92834 1020 aaKnown RBP11.39□□□□□ -0.59
HMGCR-201ENST00000287936 TRIM34Q9BYJ4 488 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 TRAPPC10P48553 1259 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 NT5C2P49902 561 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 CCZ1BP86790 482 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 CCZ1P86791 482 aaPredicted RBP11.39□□□□□ -0.59
HMGCR-201ENST00000287936 TMED8Q6PL24 325 aaPredicted RBP11.39□□□□□ -0.59
HMGCR-201ENST00000287936 ILDR1Q86SU0 546 aaPredicted RBP11.39□□□□□ -0.59
HMGCR-201ENST00000287936 CERS3Q8IU89 383 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 RAB34Q9BZG1 259 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 CSRNP2Q9H175 543 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 ATP8A2Q9NTI2 1148 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 AATFQ9NY61 560 aaKnown RBP eCLIP11.39□□□□□ -0.59
HMGCR-201ENST00000287936 TNS2Q63HR2 1409 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 C5P01031 1676 aa11.39□□□□□ -0.59
HMGCR-201ENST00000287936 STX10O60499 249 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 DTHD1Q6ZMT9 781 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 TRMT44Q8IYL2 757 aaKnown RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 WDR66Q8TBY9 1149 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 PHLPP2Q6ZVD8 1323 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 ARFGEF2Q9Y6D5 1785 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 PSMA7O14818 248 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 SPATA1Q5VX52 437 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 WWC2Q6AWC2 1192 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 ELOA2Q8IYF1 753 aaPredicted RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 CAGE1Q8TC20 777 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 RTCBQ9Y3I0 505 aaKnown RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 CTIFO43310 598 aaKnown RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 FGFR2P21802 821 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 NCBP1Q09161 790 aaKnown RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 NR5A1Q13285 461 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 TMEM266Q2M3C6 531 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 FKBP15Q5T1M5 1219 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms