RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 CNTNAP1P78357 1384 aa21.52■■□□□ 1.04
NIFK-201ENST00000285814 GOLGA8BA8MQT2 603 aa21.52■■□□□ 1.03
NIFK-201ENST00000285814 TFAP4Q01664 338 aa21.52■■□□□ 1.03
NIFK-201ENST00000285814 GPRC5DQ9NZD1 345 aa21.52■■□□□ 1.03
NIFK-201ENST00000285814 PI4KBQ9UBF8 816 aa21.52■■□□□ 1.03
NIFK-201ENST00000285814 HPS5Q9UPZ3 1129 aa21.52■■□□□ 1.03
NIFK-201ENST00000285814 TCP10L2B9ZVM9 353 aa21.51■■□□□ 1.03
NIFK-201ENST00000285814 NFXL1Q6ZNB6 911 aa21.51■■□□□ 1.03
NIFK-201ENST00000285814 FAM83AQ86UY5 434 aa21.51■■□□□ 1.03
NIFK-201ENST00000285814 FAM151AQ8WW52 585 aa21.51■■□□□ 1.03
NIFK-201ENST00000285814 TCP11L1Q9NUJ3 509 aa21.51■■□□□ 1.03
NIFK-201ENST00000285814 CCDC69A6NI79 296 aa21.5■■□□□ 1.03
NIFK-201ENST00000285814 TSPY3P0CV98 308 aa21.5■■□□□ 1.03
NIFK-201ENST00000285814 TSPY8P0CW00 308 aa21.5■■□□□ 1.03
NIFK-201ENST00000285814 SAMD7Q7Z3H4 446 aa21.5■■□□□ 1.03
NIFK-201ENST00000285814 METTL16Q86W50 562 aaKnown RBP21.5■■□□□ 1.03
NIFK-201ENST00000285814 ZSCAN29Q8IWY8 852 aaPredicted RBP21.5■■□□□ 1.03
NIFK-201ENST00000285814 VEZTQ9HBM0 779 aa21.5■■□□□ 1.03
NIFK-201ENST00000285814 NAP1L2Q9ULW6 460 aaPredicted RBP21.5■■□□□ 1.03
NIFK-201ENST00000285814 NID2Q14112 1375 aa21.5■■□□□ 1.03
NIFK-201ENST00000285814 PLIN4Q96Q06 1357 aa21.5■■□□□ 1.03
NIFK-201ENST00000285814 H7C1D1 291 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 GRIN3BO60391 1043 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 SHMT1P34896 483 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 KIF4BQ2VIQ3 1234 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 CHMP4CQ96CF2 233 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 DNAJC18Q9H819 358 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 SMC3Q9UQE7 1217 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 SLC12A7Q9Y666 1083 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 NMT2O60551 498 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 RCAN1P53805 252 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 CCDC178Q5BJE1 867 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 IFIT1BQ5T764 474 aaKnown RBP21.49■■□□□ 1.03
NIFK-201ENST00000285814 FOXP4Q8IVH2 680 aaPredicted RBP21.49■■□□□ 1.03
NIFK-201ENST00000285814 NEDD1Q8NHV4 660 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 LLPHQ9BRT6 129 aaKnown RBP21.49■■□□□ 1.03
NIFK-201ENST00000285814 IL17RBQ9NRM6 502 aa21.49■■□□□ 1.03
NIFK-201ENST00000285814 ZBTB43O43298 467 aa21.48■■□□□ 1.03
NIFK-201ENST00000285814 CCT2P78371 535 aaKnown RBP21.48■■□□□ 1.03
NIFK-201ENST00000285814 TBC1D10BQ4KMP7 808 aaPredicted RBP21.48■■□□□ 1.03
NIFK-201ENST00000285814 RBM26Q5T8P6 1007 aaKnown RBP21.48■■□□□ 1.03
NIFK-201ENST00000285814 ANKS1AQ92625 1134 aa21.48■■□□□ 1.03
NIFK-201ENST00000285814 NCOA5Q9HCD5 579 aaKnown RBP21.48■■□□□ 1.03
NIFK-201ENST00000285814 GREB1LQ9C091 1923 aaPredicted RBP21.48■■□□□ 1.03
NIFK-201ENST00000285814 RCSD1Q6JBY9 416 aa21.47■■□□□ 1.03
NIFK-201ENST00000285814 DGKHQ86XP1 1220 aa21.47■■□□□ 1.03
NIFK-201ENST00000285814 CRACR2BQ8N4Y2 399 aaPredicted RBP21.47■■□□□ 1.03
NIFK-201ENST00000285814 CSRNP1Q96S65 589 aa21.47■■□□□ 1.03
NIFK-201ENST00000285814 ZC3H4Q9UPT8 1303 aaKnown RBP21.47■■□□□ 1.03
NIFK-201ENST00000285814 DDNO94850 711 aaPredicted RBP21.46■■□□□ 1.03
NIFK-201ENST00000285814 METAP2P50579 478 aaKnown RBP eCLIP21.46■■□□□ 1.03
NIFK-201ENST00000285814 SYNE3Q6ZMZ3 975 aa21.46■■□□□ 1.03
NIFK-201ENST00000285814 MICU3Q86XE3 530 aa21.46■■□□□ 1.03
NIFK-201ENST00000285814 ZNF654Q8IZM8 581 aa21.46■■□□□ 1.03
NIFK-201ENST00000285814 DHX16O60231 1041 aaKnown RBP21.46■■□□□ 1.03
NIFK-201ENST00000285814 CTDNEP1O95476 244 aa21.46■■□□□ 1.03
NIFK-201ENST00000285814 GJB2P29033 226 aa21.46■■□□□ 1.03
NIFK-201ENST00000285814 RAB11FIP4Q86YS3 637 aa21.46■■□□□ 1.03
NIFK-201ENST00000285814 NSUN7Q8NE18 718 aaKnown RBP21.46■■□□□ 1.03
NIFK-201ENST00000285814 SMARCC2Q8TAQ2 1214 aa21.46■■□□□ 1.03
NIFK-201ENST00000285814 NOVP48745 357 aa21.45■■□□□ 1.02
NIFK-201ENST00000285814 TNNI2P48788 182 aa21.45■■□□□ 1.02
NIFK-201ENST00000285814 TNFAIP1Q13829 316 aa21.45■■□□□ 1.02
NIFK-201ENST00000285814 TATDN1Q6P1N9 297 aa21.45■■□□□ 1.02
NIFK-201ENST00000285814 CCDC17Q96LX7 622 aa21.45■■□□□ 1.02
NIFK-201ENST00000285814 MYL10Q9BUA6 226 aa21.45■■□□□ 1.02
NIFK-201ENST00000285814 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.45■■□□□ 1.02
NIFK-201ENST00000285814 PGAP2Q9UHJ9 254 aa21.45■■□□□ 1.02
NIFK-201ENST00000285814 HERC5Q9UII4 1024 aaKnown RBP21.45■■□□□ 1.02
NIFK-201ENST00000285814 GOLGA8AA7E2F4 631 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 SLURP2P0DP57 97 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 AKR1B1P15121 316 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 RXRAP19793 462 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 EPS15P42566 896 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 NUCB2P80303 420 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 TRPM4Q8TD43 1214 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 TRIM34Q9BYJ4 488 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 TMEM39BQ9GZU3 492 aa21.44■■□□□ 1.02
NIFK-201ENST00000285814 ASTN2O75129 1339 aaPredicted RBP21.44■■□□□ 1.02
NIFK-201ENST00000285814 IGKV6D-41A0A0C4DH26 115 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 JAK2O60674 1132 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 DDAH1O94760 285 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 CATIPQ7Z7H3 387 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 FAM217BQ9NTX9 383 aaPredicted RBP21.43■■□□□ 1.02
NIFK-201ENST00000285814 HACL1Q9UJ83 578 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 FAM196BA6NMK8 535 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 DTNBO60941 627 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 HMGN5P82970 282 aaKnown RBP21.43■■□□□ 1.02
NIFK-201ENST00000285814 TROAPQ12815 778 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 PKP1Q13835 747 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 RAB3GAP1Q15042 981 aa21.43■■□□□ 1.02
NIFK-201ENST00000285814 PTPDC1A2A3K4 754 aa21.42■■□□□ 1.02
NIFK-201ENST00000285814 LMOD1P29536 600 aaPredicted RBP21.42■■□□□ 1.02
NIFK-201ENST00000285814 CDC27P30260 824 aa21.42■■□□□ 1.02
NIFK-201ENST00000285814 RASA3Q14644 834 aa21.42■■□□□ 1.02
NIFK-201ENST00000285814 CEP95Q96GE4 821 aa21.42■■□□□ 1.02
NIFK-201ENST00000285814 CPLX1O14810 134 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 TBC1D12O60347 775 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 CALM1P0DP23 149 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 CALM2P0DP24 149 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms