RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 PANK1Q8TE04 598 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 DPF3Q92784 378 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 TRIM34Q9BYJ4 488 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 ZBTB21Q9ULJ3 1066 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 ZBED9Q6R2W3 1325 aa18.64■□□□□ 0.57
SOD1-201ENST00000270142 FARP2O94887 1054 aaPredicted RBP18.63■□□□□ 0.57
SOD1-201ENST00000270142 HLA-DOAP06340 250 aa18.63■□□□□ 0.57
SOD1-201ENST00000270142 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.57
SOD1-201ENST00000270142 DIEXFQ68CQ4 756 aaKnown RBP18.63■□□□□ 0.57
SOD1-201ENST00000270142 AACSQ86V21 672 aa18.63■□□□□ 0.57
SOD1-201ENST00000270142 TMOD4Q9NZQ9 345 aa18.63■□□□□ 0.57
SOD1-201ENST00000270142 IRX3P78415 501 aaPredicted RBP18.62■□□□□ 0.57
SOD1-201ENST00000270142 DEFB118Q96PH6 123 aa18.62■□□□□ 0.57
SOD1-201ENST00000270142 PAK6Q9NQU5 681 aaPredicted RBP18.62■□□□□ 0.57
SOD1-201ENST00000270142 GINM1Q9NU53 330 aa18.62■□□□□ 0.57
SOD1-201ENST00000270142 MORF4L1Q9UBU8 362 aa18.62■□□□□ 0.57
SOD1-201ENST00000270142 HOXA7P31268 230 aaPredicted RBP18.61■□□□□ 0.57
SOD1-201ENST00000270142 USP5P45974 858 aa18.61■□□□□ 0.57
SOD1-201ENST00000270142 ERC1Q8IUD2 1116 aa18.61■□□□□ 0.57
SOD1-201ENST00000270142 P2RX7Q99572 595 aaKnown RBP18.61■□□□□ 0.57
SOD1-201ENST00000270142 HTATIP2Q9BUP3 242 aa18.61■□□□□ 0.57
SOD1-201ENST00000270142 GJD2Q9UKL4 321 aa18.61■□□□□ 0.57
SOD1-201ENST00000270142 DOCK3Q8IZD9 2030 aa18.61■□□□□ 0.57
SOD1-201ENST00000270142 C19orf81C9J6K1 198 aa18.6■□□□□ 0.57
SOD1-201ENST00000270142 USP17L10C9JJH3 530 aa18.6■□□□□ 0.57
SOD1-201ENST00000270142 PEX10O60683 326 aa18.6■□□□□ 0.57
SOD1-201ENST00000270142 CHRDL2Q6WN34 429 aa18.6■□□□□ 0.57
SOD1-201ENST00000270142 TXNRD2Q9NNW7 524 aa18.6■□□□□ 0.57
SOD1-201ENST00000270142 IL1RAPL2Q9NP60 686 aa18.6■□□□□ 0.57
SOD1-201ENST00000270142 GH2P01242 217 aa18.59■□□□□ 0.57
SOD1-201ENST00000270142 TFRCP02786 760 aaKnown RBP18.59■□□□□ 0.57
SOD1-201ENST00000270142 HERVK_113P62684 666 aa18.59■□□□□ 0.57
SOD1-201ENST00000270142 MAP3K12Q12852 859 aa18.59■□□□□ 0.57
SOD1-201ENST00000270142 CERS3Q8IU89 383 aa18.59■□□□□ 0.57
SOD1-201ENST00000270142 RHPN1Q8TCX5 695 aa18.59■□□□□ 0.57
SOD1-201ENST00000270142 CRISPLD2Q9H0B8 497 aa18.59■□□□□ 0.57
SOD1-201ENST00000270142 HMGCRP04035 888 aa18.58■□□□□ 0.56
SOD1-201ENST00000270142 TRIM32Q13049 653 aa18.58■□□□□ 0.56
SOD1-201ENST00000270142 TATDN1Q6P1N9 297 aa18.58■□□□□ 0.56
SOD1-201ENST00000270142 RIOK1Q9BRS2 568 aaKnown RBP18.58■□□□□ 0.56
SOD1-201ENST00000270142 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.58■□□□□ 0.566e-7■■■□□ 18.5
SOD1-201ENST00000270142 EMILIN3Q9NT22 766 aa18.58■□□□□ 0.56
SOD1-201ENST00000270142 HSP90AB4PQ58FF6 505 aa18.57■□□□□ 0.56
SOD1-201ENST00000270142 USP17L2Q6R6M4 530 aa18.57■□□□□ 0.56
SOD1-201ENST00000270142 EHD4Q9H223 541 aa18.57■□□□□ 0.56
SOD1-201ENST00000270142 SERPINB13Q9UIV8 391 aa18.57■□□□□ 0.56
SOD1-201ENST00000270142 PLXNB2O15031 1838 aa18.57■□□□□ 0.56
SOD1-201ENST00000270142 MYH1P12882 1939 aa18.57■□□□□ 0.56
SOD1-201ENST00000270142 CAPN2P17655 700 aa18.56■□□□□ 0.56
SOD1-201ENST00000270142 CYP2B6P20813 491 aa18.56■□□□□ 0.56
SOD1-201ENST00000270142 Q3C1V9 767 aa18.56■□□□□ 0.56
SOD1-201ENST00000270142 TMED8Q6PL24 325 aaPredicted RBP18.56■□□□□ 0.56
SOD1-201ENST00000270142 POTEEQ6S8J3 1075 aa18.56■□□□□ 0.56
SOD1-201ENST00000270142 GPRC5AQ8NFJ5 357 aa18.56■□□□□ 0.56
SOD1-201ENST00000270142 TRIB2Q92519 343 aa18.56■□□□□ 0.56
SOD1-201ENST00000270142 RBM27Q9P2N5 1060 aaKnown RBP18.56■□□□□ 0.56
SOD1-201ENST00000270142 RBPJLQ9UBG7 517 aa18.56■□□□□ 0.56
SOD1-201ENST00000270142 DDX60LQ5H9U9 1706 aaKnown RBP18.55■□□□□ 0.56
SOD1-201ENST00000270142 APBB1O00213 710 aa18.55■□□□□ 0.56
SOD1-201ENST00000270142 PLCD1P51178 756 aa18.55■□□□□ 0.56
SOD1-201ENST00000270142 ERVK-9P63128 1117 aa18.55■□□□□ 0.56
SOD1-201ENST00000270142 ERVK-24P63145 666 aa18.55■□□□□ 0.56
SOD1-201ENST00000270142 ZYXQ15942 572 aaKnown RBP18.55■□□□□ 0.56
SOD1-201ENST00000270142 TTC6Q86TZ1 520 aa18.55■□□□□ 0.56
SOD1-201ENST00000270142 DIS3LQ8TF46 1054 aaKnown RBP18.55■□□□□ 0.56
SOD1-201ENST00000270142 C12orf42Q96LP6 360 aa18.55■□□□□ 0.56
SOD1-201ENST00000270142 RPTORQ8N122 1335 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 MAGEB6P1A0A0J9YX57 407 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 MS4A1P11836 297 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 PDE6AP16499 860 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 SHMT1P34896 483 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 TTF1Q15361 905 aaPredicted RBP18.54■□□□□ 0.56
SOD1-201ENST00000270142 CERKLQ49MI3 558 aaPredicted RBP18.54■□□□□ 0.56
SOD1-201ENST00000270142 SIRT2Q8IXJ6 389 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 CLASRPQ8N2M8 674 aaKnown RBP18.54■□□□□ 0.56
SOD1-201ENST00000270142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.54■□□□□ 0.56
SOD1-201ENST00000270142 GTF3C2Q8WUA4 911 aaPredicted RBP18.54■□□□□ 0.56
SOD1-201ENST00000270142 SOCS4Q8WXH5 440 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 KIF1BPQ96EK5 621 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 PAWRQ96IZ0 340 aaKnown RBP18.54■□□□□ 0.56
SOD1-201ENST00000270142 FEZ1Q99689 392 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 NUDT12Q9BQG2 462 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 PAGR1Q9BTK6 254 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 PORCNQ9H237 461 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 HMX1Q9NP08 348 aaPredicted RBP18.54■□□□□ 0.56
SOD1-201ENST00000270142 COG6Q9Y2V7 657 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 NR2E3Q9Y5X4 410 aa18.54■□□□□ 0.56
SOD1-201ENST00000270142 MAPK4P31152 587 aa18.53■□□□□ 0.56
SOD1-201ENST00000270142 EVX2Q03828 476 aa18.53■□□□□ 0.56
SOD1-201ENST00000270142 ABCB5Q2M3G0 1257 aa18.53■□□□□ 0.56
SOD1-201ENST00000270142 SLC9C2Q5TAH2 1124 aa18.53■□□□□ 0.56
SOD1-201ENST00000270142 RPAP2Q8IXW5 612 aaPredicted RBP18.53■□□□□ 0.56
SOD1-201ENST00000270142 ACER1Q8TDN7 264 aa18.53■□□□□ 0.56
SOD1-201ENST00000270142 DNAJC2Q99543 621 aaKnown RBP18.53■□□□□ 0.56
SOD1-201ENST00000270142 PRO3102Q9H379 93 aa18.53■□□□□ 0.56
SOD1-201ENST00000270142 ZNF532Q9HCE3 1301 aa18.52■□□□□ 0.56
SOD1-201ENST00000270142 GOLIM4O00461 696 aa18.52■□□□□ 0.56
SOD1-201ENST00000270142 EVI5O60447 810 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms