RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 FHOD1Q9Y613 1164 aa18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 BAZ2BQ9UIF8 2168 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 STX10O60499 249 aa18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 TSR1Q2NL82 804 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 CCDC102AQ96A19 550 aa18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 RBL2Q08999 1139 aa18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 SMC1AQ14683 1233 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 IFIT1BQ5T764 474 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 CATIPQ7Z7H3 387 aa18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 PLIN2Q99541 437 aa18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 PARD6BQ9BYG5 372 aa18.4■□□□□ 0.54
SNCAIP-202ENST00000261368 NTRK3Q16288 839 aa18.39■□□□□ 0.54
SNCAIP-202ENST00000261368 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.54
SNCAIP-202ENST00000261368 ESR2Q92731 530 aa18.39■□□□□ 0.54
SNCAIP-202ENST00000261368 INTS13Q9NVM9 706 aa18.39■□□□□ 0.54
SNCAIP-202ENST00000261368 PODXL2Q9NZ53 605 aa18.39■□□□□ 0.54
SNCAIP-202ENST00000261368 C5P01031 1676 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 MRC1P22897 1456 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 PTPREP23469 700 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 MCM7P33993 719 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 TOB1P50616 345 aaPredicted RBP18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 NLRP5P59047 1200 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 CHMP4BP1P59074 171 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 TC2NQ8N9U0 490 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 EEF2KMTQ96G04 330 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 JAG2Q9Y219 1238 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 RGPD5Q99666 1765 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 TNKSO95271 1327 aa18.39■□□□□ 0.53
SNCAIP-202ENST00000261368 SYMPKQ92797 1274 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 CSF1RP07333 972 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 CDC25AP30304 524 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 CASP14P31944 242 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 KRT2P35908 639 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 PLA2G4AP47712 749 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 CCDC93Q567U6 631 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 FBXL16Q8N461 479 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 CRACR2BQ8N4Y2 399 aaPredicted RBP18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 TAB2Q9NYJ8 693 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 FBXO2Q9UK22 296 aaPredicted RBP18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 GSG1L2A8MUP6 293 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 LIFRP42702 1097 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 IQCA1Q86XH1 822 aa18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 ENOX1Q8TC92 643 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 MRPL44Q9H9J2 332 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-202ENST00000261368 PLCD1P51178 756 aa18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 PPARAQ07869 468 aa18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 HSP90B2PQ58FF3 399 aa18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 SMIM22K7EJ46 135 aa18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 TNNT3P45378 269 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 TMTC2Q8N394 836 aa18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 GPR161Q8N6U8 529 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 ACRBPQ8NEB7 543 aa18.37■□□□□ 0.53
SNCAIP-202ENST00000261368 PIK3AP1Q6ZUJ8 805 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 SGMS1Q86VZ5 419 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 GUCA1BQ9UMX6 200 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 WDR19Q8NEZ3 1342 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 MAGEB6P1A0A0J9YX57 407 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 CDC5LQ99459 802 aaKnown RBP18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 VPS18Q9P253 973 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 A0A0U1RQJ8 604 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 KCNJ6P48051 423 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 TICAM2Q86XR7 235 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 CTCFLQ8NI51 663 aaPredicted RBP18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 ATRIPQ8WXE1 791 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 AK7Q96M32 723 aa18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 FOXP1Q9H334 677 aaPredicted RBP18.36■□□□□ 0.53
SNCAIP-202ENST00000261368 CTAGE9A4FU28 777 aa18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 GYG1P46976 350 aa18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 CC2D1AQ6P1N0 951 aaPredicted RBP18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 GPIHBP1Q8IV16 184 aa18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 ST5P78524 1137 aa18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 FCHSD1Q86WN1 690 aa18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 SRPRBQ9Y5M8 271 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 SLIT3O75094 1523 aa18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 PLEKHA8P1O95397 391 aa18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 HNRNPH2P55795 449 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 WWC2Q6AWC2 1192 aa18.35■□□□□ 0.53
SNCAIP-202ENST00000261368 ERLIN1O75477 346 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 BTG4Q9NY30 223 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 FAM193AP78312 1265 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 SPATA1Q5VX52 437 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 CAGE1Q8TC20 777 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 NIP7Q9Y221 180 aaKnown RBP eCLIP18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 PTGDRQ13258 359 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 MORC3Q14149 939 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 FAM47AQ5JRC9 791 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 TTC38Q5R3I4 469 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 SLC35F6Q8N357 371 aa18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 GNL3LQ9NVN8 582 aaKnown RBP18.34■□□□□ 0.53
SNCAIP-202ENST00000261368 FANCGO15287 622 aa18.33■□□□□ 0.53
SNCAIP-202ENST00000261368 TXLNAP40222 546 aa18.33■□□□□ 0.53
SNCAIP-202ENST00000261368 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.53
SNCAIP-202ENST00000261368 LONRF2Q1L5Z9 754 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms