RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 FCHSD1Q86WN1 690 aa17.45■□□□□ 0.38
DDX56-201ENST00000258772 CABP5Q9NP86 173 aa17.45■□□□□ 0.38
DDX56-201ENST00000258772 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
DDX56-201ENST00000258772 DNAI1Q9UI46 699 aa17.45■□□□□ 0.38
DDX56-201ENST00000258772 NFE2L3Q9Y4A8 694 aa17.45■□□□□ 0.38
DDX56-201ENST00000258772 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 NPHP1O15259 732 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 SEC23AQ15436 765 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 KANK3Q6NY19 840 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 ADGRA1Q86SQ6 560 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 PDILTQ8N807 584 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 TRIML1Q8N9V2 468 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 SDR42E1Q8WUS8 393 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 NOL10Q9BSC4 688 aaKnown RBP17.44■□□□□ 0.38
DDX56-201ENST00000258772 DACH1Q9UI36 760 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 STRCQ7RTU9 1775 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 MYH2Q9UKX2 1941 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 ARHGAP6O43182 974 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 ACTN4O43707 911 aaKnown RBP17.44■□□□□ 0.38
DDX56-201ENST00000258772 CAMTA2O94983 1202 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 CDK11BP21127 795 aaKnown RBP17.44■□□□□ 0.38
DDX56-201ENST00000258772 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 USP49Q70CQ1 688 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 GRAMD1CQ8IYS0 662 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 LRRN4CLQ8ND94 238 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 RNF26Q9BY78 433 aaPredicted RBP17.44■□□□□ 0.38
DDX56-201ENST00000258772 CSRNP2Q9H175 543 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 ANAPC4Q9UJX5 808 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 IQSEC3Q9UPP2 1182 aaPredicted RBP17.44■□□□□ 0.38
DDX56-201ENST00000258772 RTL9Q8NET4 1388 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 TNKSO95271 1327 aa17.44■□□□□ 0.38
DDX56-201ENST00000258772 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
DDX56-201ENST00000258772 ZNF827Q17R98 1081 aa17.43■□□□□ 0.38
DDX56-201ENST00000258772 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
DDX56-201ENST00000258772 ESR2Q92731 530 aa17.43■□□□□ 0.38
DDX56-201ENST00000258772 ZSCAN12O43309 604 aa17.43■□□□□ 0.38
DDX56-201ENST00000258772 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
DDX56-201ENST00000258772 MED15Q96RN5 788 aa17.43■□□□□ 0.38
DDX56-201ENST00000258772 ABCF2Q9UG63 623 aa17.43■□□□□ 0.38
DDX56-201ENST00000258772 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 SMIM22K7EJ46 135 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 NTSR2O95665 410 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 FAM53CQ9NYF3 392 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 NIP7Q9Y221 180 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX56-201ENST00000258772 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
DDX56-201ENST00000258772 PHLPP1O60346 1717 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 MAGEB6P1A0A0J9YX57 407 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 FANCGO15287 622 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 AKAP17AQ02040 695 aaKnown RBP17.42■□□□□ 0.38
DDX56-201ENST00000258772 PKN1Q16512 942 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 TRMT44Q8IYL2 757 aaKnown RBP17.42■□□□□ 0.38
DDX56-201ENST00000258772 BAG1Q99933 345 aaPredicted RBP17.42■□□□□ 0.38
DDX56-201ENST00000258772 PPP2R2CQ9Y2T4 447 aa17.42■□□□□ 0.38
DDX56-201ENST00000258772 H2AFXP16104 143 aaPredicted RBP17.41■□□□□ 0.38
DDX56-201ENST00000258772 XBP1P17861 261 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 SPECC1LQ69YQ0 1117 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 NUTM2AQ8IVF1 878 aaPredicted RBP17.41■□□□□ 0.38
DDX56-201ENST00000258772 KRT222Q8N1A0 295 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 TC2NQ8N9U0 490 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 AATFQ9NY61 560 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDX56-201ENST00000258772 RAI14Q9P0K7 980 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
DDX56-201ENST00000258772 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 VWA3AA6NCI4 1184 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 FAM205CA6NFA0 338 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 TRIM75PA6NK02 468 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 STX10O60499 249 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 ENAHQ8N8S7 591 aaPredicted RBP17.41■□□□□ 0.38
DDX56-201ENST00000258772 RIOK1Q9BRS2 568 aaKnown RBP17.41■□□□□ 0.38
DDX56-201ENST00000258772 SAMSN1Q9NSI8 373 aaKnown RBP17.41■□□□□ 0.38
DDX56-201ENST00000258772 VPS54Q9P1Q0 977 aa17.41■□□□□ 0.38
DDX56-201ENST00000258772 ZNF804BA4D1E1 1349 aa17.4■□□□□ 0.38
DDX56-201ENST00000258772 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
DDX56-201ENST00000258772 GABPB1Q06547 395 aaPredicted RBP17.4■□□□□ 0.38
DDX56-201ENST00000258772 FUT2Q10981 343 aa17.4■□□□□ 0.38
DDX56-201ENST00000258772 ZSCAN10Q96SZ4 725 aaPredicted RBP17.4■□□□□ 0.38
DDX56-201ENST00000258772 PHF20Q9BVI0 1012 aa17.4■□□□□ 0.38
DDX56-201ENST00000258772 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
DDX56-201ENST00000258772 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
DDX56-201ENST00000258772 PRPF3O43395 683 aaKnown RBP17.39■□□□□ 0.38
DDX56-201ENST00000258772 GYG1P46976 350 aa17.39■□□□□ 0.38
DDX56-201ENST00000258772 PLCD1P51178 756 aa17.39■□□□□ 0.38
DDX56-201ENST00000258772 ADKP55263 362 aaKnown RBP17.39■□□□□ 0.38
DDX56-201ENST00000258772 NR1I3Q14994 352 aa17.39■□□□□ 0.38
DDX56-201ENST00000258772 EARS2Q5JPH6 523 aaKnown RBP17.39■□□□□ 0.38
DDX56-201ENST00000258772 SRRTQ9BXP5 876 aaKnown RBP17.39■□□□□ 0.38
DDX56-201ENST00000258772 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.38
DDX56-201ENST00000258772 IGSF3O75054 1194 aa17.39■□□□□ 0.37
DDX56-201ENST00000258772 URI1O94763 535 aaPredicted RBP17.39■□□□□ 0.37
DDX56-201ENST00000258772 KRT2P35908 639 aa17.39■□□□□ 0.37
DDX56-201ENST00000258772 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
DDX56-201ENST00000258772 EPSTI1Q96J88 318 aa17.39■□□□□ 0.37
DDX56-201ENST00000258772 CDC5LQ99459 802 aaKnown RBP17.39■□□□□ 0.37
DDX56-201ENST00000258772 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
DDX56-201ENST00000258772 V9GY48 417 aaPredicted RBP17.39■□□□□ 0.37
DDX56-201ENST00000258772 A0A087X0B3 334 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 LOC102724428A0A0B4J2F2 783 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 A0A0G2JS52 829 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms