RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 LIFRP42702 1097 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 CHRNDQ07001 517 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 SLC39A14Q15043 492 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 AKNAD1Q5T1N1 836 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 MRFAP1Q9Y605 127 aa21.66■■□□□ 1.06
SNX4-201ENST00000251775 CASQ1P31415 396 aa21.65■■□□□ 1.06
SNX4-201ENST00000251775 PPP2R3AQ06190 1150 aa21.65■■□□□ 1.06
SNX4-201ENST00000251775 INTS13Q9NVM9 706 aa21.65■■□□□ 1.06
SNX4-201ENST00000251775 THRAP3Q9Y2W1 955 aaKnown RBP21.65■■□□□ 1.06
SNX4-201ENST00000251775 SYKP43405 635 aa21.65■■□□□ 1.06
SNX4-201ENST00000251775 GNG11P61952 73 aa21.65■■□□□ 1.06
SNX4-201ENST00000251775 HPSEQ9Y251 543 aa21.65■■□□□ 1.06
SNX4-201ENST00000251775 SLC4A4Q9Y6R1 1079 aa21.65■■□□□ 1.06
SNX4-201ENST00000251775 FUT8Q9BYC5 575 aa21.64■■□□□ 1.06
SNX4-201ENST00000251775 PARD6BQ9BYG5 372 aa21.64■■□□□ 1.06
SNX4-201ENST00000251775 TRIM34Q9BYJ4 488 aa21.64■■□□□ 1.06
SNX4-201ENST00000251775 ARFGAP3Q9NP61 516 aa21.64■■□□□ 1.06
SNX4-201ENST00000251775 GPS2Q13227 327 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 MAPK8IP2Q13387 824 aaPredicted RBP21.64■■□□□ 1.05
SNX4-201ENST00000251775 PNOCQ13519 176 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 MFSD6Q6ZSS7 791 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 MIGA1Q8NAN2 632 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 FANCLQ9NW38 375 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 SLC12A7Q9Y666 1083 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 PNPLA7Q6ZV29 1317 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 BCL9LQ86UU0 1499 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 TAF1P21675 1872 aa21.64■■□□□ 1.05
SNX4-201ENST00000251775 TDO2P48775 406 aa21.63■■□□□ 1.05
SNX4-201ENST00000251775 KIFC2Q96AC6 838 aa21.63■■□□□ 1.05
SNX4-201ENST00000251775 CICQ96RK0 1608 aaPredicted RBP21.63■■□□□ 1.05
SNX4-201ENST00000251775 CNNM2Q9H8M5 875 aa21.63■■□□□ 1.05
SNX4-201ENST00000251775 IQSEC3Q9UPP2 1182 aaPredicted RBP21.63■■□□□ 1.05
SNX4-201ENST00000251775 GNL2Q13823 731 aaKnown RBP21.63■■□□□ 1.05
SNX4-201ENST00000251775 PTPAQ15257 358 aa21.63■■□□□ 1.05
SNX4-201ENST00000251775 RRP12Q5JTH9 1297 aaKnown RBP21.63■■□□□ 1.05
SNX4-201ENST00000251775 STK11IPQ8N1F8 1099 aa21.63■■□□□ 1.05
SNX4-201ENST00000251775 ZKSCAN3Q9BRR0 538 aa21.63■■□□□ 1.05
SNX4-201ENST00000251775 KRT23Q9C075 422 aa21.63■■□□□ 1.05
SNX4-201ENST00000251775 LRP2BPQ9P2M1 347 aa21.63■■□□□ 1.05
SNX4-201ENST00000251775 TBX2Q13207 712 aaPredicted RBP21.62■■□□□ 1.05
SNX4-201ENST00000251775 SHC4Q6S5L8 630 aa21.62■■□□□ 1.05
SNX4-201ENST00000251775 IPO4Q8TEX9 1081 aaKnown RBP21.62■■□□□ 1.05
SNX4-201ENST00000251775 STAG1Q8WVM7 1258 aa21.62■■□□□ 1.05
SNX4-201ENST00000251775 RABGGTAQ92696 567 aa21.62■■□□□ 1.05
SNX4-201ENST00000251775 BAG1Q99933 345 aaPredicted RBP21.62■■□□□ 1.05
SNX4-201ENST00000251775 SLC26A6Q9BXS9 759 aa21.62■■□□□ 1.05
SNX4-201ENST00000251775 GOLGA6L9A6NEM1 432 aa21.62■■□□□ 1.05
SNX4-201ENST00000251775 GNAT2P19087 354 aa21.62■■□□□ 1.05
SNX4-201ENST00000251775 ZSCAN26Q16670 478 aa21.62■■□□□ 1.05
SNX4-201ENST00000251775 MAP3K14Q99558 947 aa21.62■■□□□ 1.05
SNX4-201ENST00000251775 WTIPA6NIX2 430 aaPredicted RBP21.61■■□□□ 1.05
SNX4-201ENST00000251775 TOGARAM2Q6ZUX3 1019 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 ADGRA1Q86SQ6 560 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.61■■□□□ 1.05
SNX4-201ENST00000251775 NACAP1Q9BZK3 213 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 TOMM22Q9NS69 142 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 A0A1B0GUL6 1792 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 STK36Q9NRP7 1315 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 KCNQ2O43526 872 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 MYO1BO43795 1136 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 GYS2P54840 703 aa21.61■■□□□ 1.05
SNX4-201ENST00000251775 SSRP1Q08945 709 aaKnown RBP21.61■■□□□ 1.05
SNX4-201ENST00000251775 PPP6R2O75170 966 aa21.6■■□□□ 1.05
SNX4-201ENST00000251775 FMNL1O95466 1100 aaPredicted RBP21.6■■□□□ 1.05
SNX4-201ENST00000251775 C3orf67Q6ZVT6 689 aa21.6■■□□□ 1.05
SNX4-201ENST00000251775 CASZ1Q86V15 1759 aa21.6■■□□□ 1.05
SNX4-201ENST00000251775 GUCY1A2P33402 732 aa21.6■■□□□ 1.05
SNX4-201ENST00000251775 TRIM29Q14134 588 aa21.6■■□□□ 1.05
SNX4-201ENST00000251775 OLFM4Q6UX06 510 aa21.6■■□□□ 1.05
SNX4-201ENST00000251775 METTL16Q86W50 562 aaKnown RBP21.6■■□□□ 1.05
SNX4-201ENST00000251775 FOXP4Q8IVH2 680 aaPredicted RBP21.6■■□□□ 1.05
SNX4-201ENST00000251775 DHX58Q96C10 678 aa21.6■■□□□ 1.05
SNX4-201ENST00000251775 COL5A3P25940 1745 aaPredicted RBP21.59■■□□□ 1.05
SNX4-201ENST00000251775 SPATA31A5Q5VU36 1347 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 SPATA31A7Q8IWB4 1347 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 FAM237AA0A1B0GTK4 181 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 STX10O60499 249 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 IFNAR1P17181 557 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 CYP7A1P22680 504 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 TC2NQ8N9U0 490 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 NID2Q14112 1375 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 H3BQF6 201 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 GYG1P46976 350 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 PDE4BQ07343 736 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 LONRF2Q1L5Z9 754 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 GOLGA1Q92805 767 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 EXOC4Q96A65 974 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 ADAM21Q9UKJ8 722 aa21.59■■□□□ 1.05
SNX4-201ENST00000251775 BMP6P22004 513 aa21.58■■□□□ 1.05
SNX4-201ENST00000251775 WTAPQ15007 396 aa21.58■■□□□ 1.05
SNX4-201ENST00000251775 ERFEQ4G0M1 354 aa21.58■■□□□ 1.05
SNX4-201ENST00000251775 PSD3Q9NYI0 1048 aa21.58■■□□□ 1.05
SNX4-201ENST00000251775 ABCF2Q9UG63 623 aa21.58■■□□□ 1.05
SNX4-201ENST00000251775 ZNF804BA4D1E1 1349 aa21.58■■□□□ 1.04
SNX4-201ENST00000251775 PDILTQ8N807 584 aa21.58■■□□□ 1.04
SNX4-201ENST00000251775 SDR42E1Q8WUS8 393 aa21.58■■□□□ 1.04
SNX4-201ENST00000251775 CLIC6Q96NY7 704 aa21.58■■□□□ 1.04
SNX4-201ENST00000251775 CDC5LQ99459 802 aaKnown RBP21.58■■□□□ 1.04
SNX4-201ENST00000251775 SMIM22K7EJ46 135 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 TXLNAP40222 546 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms