RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 DHX16O60231 1041 aaKnown RBP15.52■□□□□ 0.08
SLIRP-201ENST00000238688 CHGBP05060 677 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 GJA5P36382 358 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 RCAN1P53805 252 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 PPP4CP60510 307 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 TOB2Q14106 344 aaPredicted RBP15.52■□□□□ 0.08
SLIRP-201ENST00000238688 SUPT20HL1Q3ZLR7 823 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 APOBEC3HQ6NTF7 200 aaKnown RBP15.52■□□□□ 0.08
SLIRP-201ENST00000238688 MB21D2Q8IYB1 491 aaPredicted RBP15.52■□□□□ 0.08
SLIRP-201ENST00000238688 STAG1Q8WVM7 1258 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 ZDHHC15Q96MV8 337 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 R3HDMLQ9H3Y0 253 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 TAOK2Q9UL54 1235 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 SMC3Q9UQE7 1217 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 SLC4A4Q9Y6R1 1079 aa15.52■□□□□ 0.08
SLIRP-201ENST00000238688 FOCADQ5VW36 1801 aa15.52■□□□□ 0.07
SLIRP-201ENST00000238688 TCP10L2B9ZVM9 353 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 SLC3A2P08195 630 aaKnown RBP15.51■□□□□ 0.07
SLIRP-201ENST00000238688 TDO2P48775 406 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 CACNB3P54284 484 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 HMGN5P82970 282 aaKnown RBP15.51■□□□□ 0.07
SLIRP-201ENST00000238688 MECOMQ03112 1051 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 DGKZQ13574 1117 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 STOX1Q6ZVD7 989 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 SPRYD3Q8NCJ5 442 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 WNK4Q96J92 1243 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 TMEM39BQ9GZU3 492 aa15.51■□□□□ 0.07
SLIRP-201ENST00000238688 UNCXA6NJT0 531 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 PPP1R12BO60237 982 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-201ENST00000238688 PFKFB2O60825 505 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 MCM4P33991 863 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 SART3Q15020 963 aaKnown RBP15.5■□□□□ 0.07
SLIRP-201ENST00000238688 SLFNL1Q499Z3 407 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 SBK1Q52WX2 424 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 AKNAD1Q5T1N1 836 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 Q6ZUG5 572 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 TMTC2Q8N394 836 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 LCORLQ8N3X6 602 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 TNPO1Q92973 898 aaKnown RBP15.5■□□□□ 0.07
SLIRP-201ENST00000238688 GTF3C6Q969F1 213 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 TEKT1Q969V4 418 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 SLC10A4Q96EP9 437 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 ARMT1Q9H993 441 aa15.5■□□□□ 0.07
SLIRP-201ENST00000238688 ARPP21Q9UBL0 812 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-201ENST00000238688 BAZ2AQ9UIF9 1905 aaKnown RBP15.49■□□□□ 0.07
SLIRP-201ENST00000238688 NAV1Q8NEY1 1877 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 CDK5RAP2Q96SN8 1893 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 BRD1O95696 1058 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 LIFRP42702 1097 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 TNFAIP1Q13829 316 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 ME3Q16798 604 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 SKOR2Q2VWA4 1001 aaPredicted RBP15.49■□□□□ 0.07
SLIRP-201ENST00000238688 HHIPL2Q6UWX4 724 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 MFSD6Q6ZSS7 791 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 AMOTL1Q8IY63 956 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 CFHR5Q9BXR6 569 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 EPB41L4AQ9HCS5 686 aaPredicted RBP15.49■□□□□ 0.07
SLIRP-201ENST00000238688 TPCN1Q9ULQ1 816 aa15.49■□□□□ 0.07
SLIRP-201ENST00000238688 FGRP09769 529 aa15.48■□□□□ 0.07
SLIRP-201ENST00000238688 ZBTB48P10074 688 aaPredicted RBP15.48■□□□□ 0.07
SLIRP-201ENST00000238688 PRDX5P30044 214 aa15.48■□□□□ 0.07
SLIRP-201ENST00000238688 PPP2R5BQ15173 497 aa15.48■□□□□ 0.07
SLIRP-201ENST00000238688 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.48■□□□□ 0.07
SLIRP-201ENST00000238688 TAF6LQ9Y6J9 622 aa15.48■□□□□ 0.07
SLIRP-201ENST00000238688 NID2Q14112 1375 aa15.48■□□□□ 0.07
SLIRP-201ENST00000238688 MROH7-TTC4A0A0A0MT08 1334 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 GAKO14976 1311 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 CCDC85CA6NKD9 419 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 IGF2BP3O00425 579 aaKnown RBP eCLIP15.47■□□□□ 0.07
SLIRP-201ENST00000238688 PRC1O43663 620 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 CPA1P15085 419 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 IREB2P48200 963 aaKnown RBP15.47■□□□□ 0.07
SLIRP-201ENST00000238688 SREBF2Q12772 1141 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 DIXDC1Q155Q3 683 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
SLIRP-201ENST00000238688 FKBP1CQ5VVH2 108 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 SGMS1Q86VZ5 419 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 ANKRD13AQ8IZ07 590 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 ZNF296Q8WUU4 475 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-201ENST00000238688 BRF1Q92994 677 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 ZNF287Q9HBT7 754 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
SLIRP-201ENST00000238688 MANSC4A6NHS7 340 aaPredicted RBP15.46■□□□□ 0.07
SLIRP-201ENST00000238688 GPR25O00155 361 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 TNNI2P48788 182 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 RGS19P49795 217 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 PPARAQ07869 468 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 CCDC178Q5BJE1 867 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 FAM83AQ86UY5 434 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 IFNL1Q8IU54 200 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.071e-8■■■■■ 34
SLIRP-201ENST00000238688 ZNF384Q8TF68 577 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 ESR2Q92731 530 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 PTPN18Q99952 460 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.46■□□□□ 0.07
SLIRP-201ENST00000238688 ROBO3Q96MS0 1386 aa15.46■□□□□ 0.07
SLIRP-201ENST00000238688 DDX60LQ5H9U9 1706 aaKnown RBP15.46■□□□□ 0.06
SLIRP-201ENST00000238688 GPR75-ASB3A0A0A6YYF3 556 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms