RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TRIM68Q6AZZ1 485 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 IFNL2Q8IZJ0 200 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 CDC37L1Q7L3B6 337 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 GPT2Q8TD30 523 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 BBOF1Q8ND07 529 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 RGS22Q8NE09 1264 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 TYW1Q9NV66 732 aaKnown RBP9.1□□□□□ -0.95
APOB-201ENST00000233242 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
APOB-201ENST00000233242 KLHL30Q0D2K2 578 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 LONRF2Q1L5Z9 754 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 KLHL7Q8IXQ5 586 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 TUBB6Q9BUF5 446 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 STK38LQ9Y2H1 464 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 IKBKBO14920 756 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 LRRC23Q53EV4 343 aaPredicted RBP9.1□□□□□ -0.95
APOB-201ENST00000233242 POGZQ7Z3K3 1410 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 HVCN1Q96D96 273 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 LZTS2Q9BRK4 669 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 DRC3Q9H069 523 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 KRT15P19012 456 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 PHBP35232 272 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 DNM2P50570 870 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 PPP4R1Q8TF05 950 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 TACC3Q9Y6A5 838 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 OPHN1O60890 802 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 GJC1P36383 396 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 GAS2L3Q86XJ1 694 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 PPP1R13BQ96KQ4 1090 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 TESK2Q96S53 571 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 TAB2Q9NYJ8 693 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 NESP48681 1621 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 GRK7Q8WTQ7 553 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 SPTLC3Q9NUV7 552 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 MAN1A1P33908 653 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 RETREG2Q8NC44 543 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 SCOCQ9UIL1 159 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 AMFRQ9UKV5 643 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 SPDYE3A6NKU9 549 aa9.1□□□□□ -0.95
APOB-201ENST00000233242 SKIP12755 728 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 CERS3Q8IU89 383 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 IQSEC3Q9UPP2 1182 aaPredicted RBP9.09□□□□□ -0.95
APOB-201ENST00000233242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.09□□□□□ -0.95
APOB-201ENST00000233242 PEX19P40855 299 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 IFT88Q13099 833 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 MYO1CO00159 1063 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 PDE4DQ08499 809 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 DCAF17Q5H9S7 520 aaPredicted RBP9.09□□□□□ -0.95
APOB-201ENST00000233242 H7C1D1 291 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 TPX2Q9ULW0 747 aaKnown RBP9.09□□□□□ -0.95
APOB-201ENST00000233242 BCRP11274 1271 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 ARL1P40616 181 aaPredicted RBP9.09□□□□□ -0.95
APOB-201ENST00000233242 TTC38Q5R3I4 469 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 GSDMBQ8TAX9 411 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 TXNDC9O14530 226 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 FNBP4Q8N3X1 1017 aaPredicted RBP9.09□□□□□ -0.95
APOB-201ENST00000233242 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 CCT6BQ92526 530 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 EPSTI1Q96J88 318 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 ZMAT2Q96NC0 199 aaKnown RBP9.09□□□□□ -0.95
APOB-201ENST00000233242 CTTNBP2NLQ9P2B4 639 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 HOXA7P31268 230 aaPredicted RBP9.09□□□□□ -0.95
APOB-201ENST00000233242 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 MAGEF1Q9HAY2 307 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 PNMA6AP0CW24 399 aaPredicted RBP9.09□□□□□ -0.95
APOB-201ENST00000233242 TNNI2P48788 182 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 LRMPQ12912 555 aa9.09□□□□□ -0.95
APOB-201ENST00000233242 ATP5J2-PTCD1G3V325 749 aa9.09□□□□□ -0.96
APOB-201ENST00000233242 UAP1Q16222 522 aaPredicted RBP9.09□□□□□ -0.96
APOB-201ENST00000233242 TADA2BQ86TJ2 420 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 ANTXR1Q9H6X2 564 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 MAGEB6P1A0A0J9YX57 407 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 CLCN6P51797 869 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 MYSM1Q5VVJ2 828 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 B4DLN1 442 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 KCNJ18B7U540 433 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 KRIT1O00522 736 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 MRPL12P52815 198 aaKnown RBP9.08□□□□□ -0.96
APOB-201ENST00000233242 KCNJ12Q14500 433 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 HAUS8Q9BT25 410 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 RPGRQ92834 1020 aaKnown RBP9.08□□□□□ -0.96
APOB-201ENST00000233242 JPH2Q9BR39 696 aaPredicted RBP9.08□□□□□ -0.96
APOB-201ENST00000233242 RABEP2Q9H5N1 569 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 EXOC7Q9UPT5 735 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 BZW2Q9Y6E2 419 aaKnown RBP9.08□□□□□ -0.96
APOB-201ENST00000233242 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 SMTNP53814 917 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 ST5P78524 1137 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 KRT25Q7Z3Z0 450 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 TRIM31Q9BZY9 425 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 KDM5DQ9BY66 1539 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 GOLGA8QA0A0J9YX86 632 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 GOLGA8OA6NCC3 632 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 GOLGA8NF8WBI6 632 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 CRCPO75575 148 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 LMBR1LQ6UX01 489 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 CENPKQ9BS16 269 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 PPP1R1BQ9UD71 204 aaPredicted RBP9.08□□□□□ -0.96
APOB-201ENST00000233242 CHUKO15111 745 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 ZNF174Q15697 407 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms