RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 STIM2Q9P246 746 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 TRPC6Q9Y210 931 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 ARHGAP27Q6ZUM4 889 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 NELFCDQ8IXH7 590 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 IGSF22Q8N9C0 903 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 KLHDC4Q8TBB5 520 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 GLG1Q92896 1179 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 BAG6P46379 1132 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 RILPL1Q5EBL4 403 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 BEND3Q5T5X7 828 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 FAM102BQ5T8I3 360 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 NBPF11Q86T75 865 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 STMN2Q93045 179 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 MLXIPQ9HAP2 919 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 USP40Q9NVE5 1235 aa14.73□□□□□ -0.05
COL1A1-201ENST00000225964 MYL10Q9BUA6 226 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 EXOC3O60645 756 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 OATP04181 439 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 A1BGP04217 495 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 P4HA1P13674 534 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 HPDP32754 393 aaPredicted RBP14.72□□□□□ -0.05
COL1A1-201ENST00000225964 IFRD2Q12894 506 aaPredicted RBP14.72□□□□□ -0.05
COL1A1-201ENST00000225964 PAK1Q13153 545 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 CYP26C1Q6V0L0 522 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 TPH2Q8IWU9 490 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 OTUD6AQ7L8S5 288 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 SRGAP1Q7Z6B7 1085 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 TNNI1P19237 187 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.05
COL1A1-201ENST00000225964 CTTNBP2NLQ9P2B4 639 aa14.72□□□□□ -0.05
COL1A1-201ENST00000225964 MAP3K1Q13233 1512 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 PALM3A6NDB9 673 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 TTC36A6NLP5 189 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 TRIM14Q14142 442 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 KRT25Q7Z3Z0 450 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 CEP57Q86XR8 500 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 FAM193BQ96PV7 902 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 TESPA1A2RU30 521 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 NR1I2O75469 434 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 FAM47AQ5JRC9 791 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 GKAP1Q5VSY0 366 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 ANO1Q5XXA6 986 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 SEPT14Q6ZU15 432 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 FAM76AQ8TAV0 307 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 TRIM31Q9BZY9 425 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 NCOA5Q9HCD5 579 aaKnown RBP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 LRWD1Q9UFC0 647 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 VAMP4O75379 141 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 KCNA6P17658 529 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 MAN1A1P33908 653 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 HERC4Q5GLZ8 1057 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 APPBP2Q92624 585 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 ZHX1Q9UKY1 873 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 SPDYE16A6NNV3 312 aaPredicted RBP14.71□□□□□ -0.05
COL1A1-201ENST00000225964 TCP10L2B9ZVM9 353 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 NLRX1Q86UT6 975 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 CABP7Q86V35 215 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 LPIN2Q92539 896 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 DCTPP1Q9H773 170 aa14.71□□□□□ -0.05
COL1A1-201ENST00000225964 YARSP54577 528 aaKnown RBP14.71□□□□□ -0.06
COL1A1-201ENST00000225964 DBNDD2Q9BQY9 259 aa14.71□□□□□ -0.06
COL1A1-201ENST00000225964 MROH5Q6ZUA9 1318 aa14.71□□□□□ -0.06
COL1A1-201ENST00000225964 PPP2R3AQ06190 1150 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 LRMPQ12912 555 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 PLEKHM2Q8IWE5 1019 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 DEPTORQ8TB45 409 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 GTF3C6Q969F1 213 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 KCNH3Q9ULD8 1083 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 TUBB4AP04350 444 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 FAM160A1Q05DH4 1040 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 DDX17Q92841 729 aaKnown RBP14.7□□□□□ -0.06
COL1A1-201ENST00000225964 ANGEL1Q9UNK9 670 aaKnown RBP14.7□□□□□ -0.06
COL1A1-201ENST00000225964 FRMPD2Q68DX3 1309 aaPredicted RBP14.7□□□□□ -0.06
COL1A1-201ENST00000225964 ACTN4O43707 911 aaKnown RBP14.7□□□□□ -0.06
COL1A1-201ENST00000225964 BCRP11274 1271 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 GTF2IP78347 998 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 PSMD6Q15008 389 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 DPY19L2Q6NUT2 758 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 ASIC3Q9UHC3 531 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 MIER3Q7Z3K6 550 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 SNX21Q969T3 373 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 SLC52A2Q9HAB3 445 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 ARHGAP44Q17R89 818 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 G2E3Q7L622 706 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 CCDC89Q8N998 374 aa14.7□□□□□ -0.06
COL1A1-201ENST00000225964 DCPSQ96C86 337 aaKnown RBP14.7□□□□□ -0.06
COL1A1-201ENST00000225964 ZNF532Q9HCE3 1301 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 TUBB4BP68371 445 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 ITKQ08881 620 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 LONRF3Q496Y0 759 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 BSPRYQ5W0U4 402 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 ATL3Q6DD88 541 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 C8orf74Q6P047 294 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 RDH13Q8NBN7 331 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 PHKBQ93100 1093 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 LZTS2Q9BRK4 669 aa14.69□□□□□ -0.06
COL1A1-201ENST00000225964 SESTD1Q86VW0 696 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms